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Name : ccmF (PFLU1763) Accession : YP_002871400.1 Strain : Pseudomonas fluorescens SBW25 Genome accession: NC_012660 Putative virulence/resistance : Unknown Product : cytochrome C biogenesis protein Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG1138 EC number : - Position : 1927299 - 1929287 bp Length : 1989 bp Strand : + Note : - DNA sequence : ATGACGTCCGCACTGTTTATTCCAGAGCTGGGCCAGTTGGCGATGATCCTCGCCCTGTGCTTTGCCATCGTTCAGGCCGT GGTGCCGTTACTCGGTGCCTGGCGCGGCGACCGCTTGTGGATGAGCCTGGCGCAGCCGGCCGCCTGGGGCCAATGTGCCT TCCTGGTGTTCGCGTTCGGTTGCCTGACCTACGCCTTCATGACCGACGACTTTTCCGTCGCCTATGTGGCGAATAACTCC AACAGCGCGTTGCCTTGGTACTACAAGTTCAGCGCTGTGTGGGGCGCCCACGAAGGTTCGTTGCTGCTGTGGGCGCTGAT CCTCGGCGGCTGGACCTTCGCGGTGTCGGTGTTCTCGCGCCAGCTGCCGCAAGTGATGCTGGCCCGCGTACTGGCAGTGA TGGGCATGATCAGCATCGGCTTCCTGCTGTTCCTGATCATGACCTCCAACCCGTTCACCCGCATCCTGCCGCAGATCCCG GTGGACGGGCACGACCTCAACCCGCTGCTGCAGGACATCGGCCTGATCGTGCACCCGCCGATGCTCTACATGGGCTATGT CGGTTTCTCCGTGGCCTTTGCCTTCGCCATCGCCGCCTTGCTCGGCGGGCGCCTCGATGCGGCCTGGGCGCGCTGGTCGC GGCCGTGGACCATCGTCGCCTGGGCCTTCCTCGGGATTGGTATCACCCTCGGCTCCTGGTGGGCCTATTACGAGCTCGGC TGGGGCGGCTGGTGGTTCTGGGACCCGGTGGAAAATGCCTCGTTCATGCCTTGGTTGGTCGGCACTGCGCTGATTCACTC GTTGGCGGTCACCGAAAAGCGCGGTGTGTTCAAGAGCTGGACCGTGCTGCTGGCCATCGCGGCATTTTCCCTCAGCCTGC TCGGCACCTTCCTCGTGCGTTCGGGCGTGCTGACCTCGGTGCATGCGTTCGCGTCCGACCCGGAGCGCGGCGTGTTCATC CTGATCTTCCTGCTGTTTGTGGTCGGCGGCTCCCTGACGTTGTTTGCGTTGCGCGCGCCAGTGGTCAAGAGCCAGGTCGG CTTTAACCTGTGGTCGCGGGAAACCCTGTTGCTGGGCAATAACCTGGTGCTGGTGGTGGCCGCTTCGATGATCCTGCTCG GCACTCTGTACCCGTTGGTGCTGGACGCCTTGAGCGGCGCCAAGCTGTCCGTTGGCCCGCCGTATTTCAACGCGTTGTTT ATCCCGTTGATGGGCCTGTTGATGGTGGTGATGGCGGTGGGCATGCTGGTGCGCTGGAAAGACACCCCGGTGAAATGGCT GGCCGGCATGCTGATGCCGGTGTTGCTCGGCAGCGTGGCCTTGGCGGTGATCGCCGGGTTTGCCTATGGCGACTTCAACT GGGCGGTGCTCGCGACCTTCCTGCTCGCCGCCTGGGTGTTGCTGGCCGGCGTGCGCGACATCTTCGACAAGACCCGTCAC AAAGGCCTGGTCAAAGGCCTGCCGACCCTGACCCGCAGCTACTGGGGCATGCAGATCGCCCACATTGGCATCGCCGTGTG CGCCCTTGGCGTGGTGCTCTCCAGCCAGAACAGCGCCGAGCGCGACTTGCGCCTGGCGCCGGGCGAGTCCATGGACCTGG CCGGTTACCACTTCATCTTCGAAGGCGCCAAGCACTTCGAAGGGCCGAACTTTACGTCAGACAAAGGCACCGTGCGTGTC GTGCGCAATGGCAAGGAAATCGCCGTGCTGCACCCGGAAAAACGCCTGTACACCGTGCAGAGTTCGATGATGACCGAAGC CGGCATCGACGCCGGTTTCACCCGTGACCTGTATGTGGCGCTGGGTGAACCGTTGGGCGAGGGCGCCTGGGCGGTGCGGG TGCATGTCAAACCGTTTGTGCGCTGGATCTGGTTCGGCGGCTTGCTTACCGGCTTTGGTGGTTTGCTGGCCGCGCTGGAC CGACGGTATCGGGTCAAGGTCAAGAGCCGGGTGCGTGAAGCCCTCGGCCTGCAAGGAGCGGCGGTATGA Protein sequence : MTSALFIPELGQLAMILALCFAIVQAVVPLLGAWRGDRLWMSLAQPAAWGQCAFLVFAFGCLTYAFMTDDFSVAYVANNS NSALPWYYKFSAVWGAHEGSLLLWALILGGWTFAVSVFSRQLPQVMLARVLAVMGMISIGFLLFLIMTSNPFTRILPQIP VDGHDLNPLLQDIGLIVHPPMLYMGYVGFSVAFAFAIAALLGGRLDAAWARWSRPWTIVAWAFLGIGITLGSWWAYYELG WGGWWFWDPVENASFMPWLVGTALIHSLAVTEKRGVFKSWTVLLAIAAFSLSLLGTFLVRSGVLTSVHAFASDPERGVFI LIFLLFVVGGSLTLFALRAPVVKSQVGFNLWSRETLLLGNNLVLVVAASMILLGTLYPLVLDALSGAKLSVGPPYFNALF IPLMGLLMVVMAVGMLVRWKDTPVKWLAGMLMPVLLGSVALAVIAGFAYGDFNWAVLATFLLAAWVLLAGVRDIFDKTRH KGLVKGLPTLTRSYWGMQIAHIGIAVCALGVVLSSQNSAERDLRLAPGESMDLAGYHFIFEGAKHFEGPNFTSDKGTVRV VRNGKEIAVLHPEKRLYTVQSSMMTEAGIDAGFTRDLYVALGEPLGEGAWAVRVHVKPFVRWIWFGGLLTGFGGLLAALD RRYRVKVKSRVREALGLQGAAV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ccmF | AAN62106.1 | putative cytochrome C-type biogenesis protein CcmF | Not tested | PAGI-2(C) | Protein | 9e-137 | 57 |
| ccmF | YP_217241.1 | cytochrome c-type biogenesis protein | Not tested | SPI-12 | Protein | 4e-123 | 55 |
