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Name : PFLU2642 (PFLU2642) Accession : YP_002872228.1 Strain : Pseudomonas fluorescens SBW25 Genome accession: NC_012660 Putative virulence/resistance : Unknown Product : 3 membrane-bound lytic murein transglycosylase D Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1388 EC number : - Position : 2914541 - 2915956 bp Length : 1416 bp Strand : - Note : - DNA sequence : ATGTCGTCATCTATTCGTAAATCCAACCATTCAGACGCATTGACCCGCCTGGCTCAAGCTGTGGCGGTGGCTGTGTCCGC CACGCTGGCGGGCTGCCAATCAAGCAGTTTCACCGCACAATCCACCGTGCATCCCAAGCCGAACCTTAGCGCCAAGATCA AACAGAAACCCGTCATTTGGCTGTCAGAGAAGCCTGCACCCGAAGTGCCCCAGGACGTCTGGGAACGCATGCGACGGGGC TTTCAATTGCAGGAAGGCCTAGGCGTCAACCCGCGCATCGAGCAACAGCGCCTGTGGTTCGCCAGCAACCCTTCCTTCCT GGAGAACGCCGGAGAACGCGGCAGCCTCTACATTCACTACATCGTCGAACGCCTTGAAGAACGCAACATGCCCCTGGAGC TGGCGCTGCTGCCGGTGATTGAAAGTGCCTACAACCCGATGGCCTATTCGCGCAGCGATGCGGTCGGCCTGTGGCAGTTC ATCCCCTCCACCGGGCGCTACTTCAACCTGCGCCAGACCCGCGCCTACGACGGCCGCCGCGACATCACCGCCTCCACCAC CGCCGCCCTCGACTACCTGACCCGCCTGCACGACATGTTCAACGGCGACTGGCTGTTGGCCCTGGCCGCCTACAACGCCG GCGAAGGCACGGTGAGCCGGGCAATCGAGCGCAACGAGAAGCTCGGCCTGCCGACCGACTACTGGAACCTGCCCCTGCCC CAGGAAACCAAGGACTACGTGCCCAAGTTCCTGGCACTGTCCCAGGTGGTGCTGGCGCCCGAGGCCTATGGCGTCAACCT GAACCCGATCGCCAACACGCCGTACTTCGAAGTGGTTGAAGTCAAGCAGAGCATGGACCTGTCACGGGTTGCCGCGCTGG CCGAGATCGACGAAGACGAACTGTTCCAGCTCAACCCTGCCCTGAAACAACGCACCACCCTGGACGGTCCCCAGCATTTG CTGGTGCCCAGCTCCAAGGCGCAACTGCTCACCAGCACCCTGTCGACGATGAAGCCGGAAGAATTACTGGCGATGCGTCC GAAAAAGCAGGTGTTCGACGAAGTCGAGACCGCCCGGGTGGCCGGCCGCAGCCGCAGCTACAAAGTGCGCAGTGGCGACA ACCTCACGCTGATCGCCAAGGCCAACAAAGTCGACGTGCATGACCTGCAACGCTGGAACAAGCTCAACGGCCAGGCCCTC AAGGTCGGCCAGACCCTGGTGATGCAGGACACGCGCAAGCTGGTGGCCAAGGCCGACAGCAAGAAGCCAGTGCAGTACAA AGTCAAGAAAGGCGACTCGCTGTACATCGTCGCCAAGCGCTTCAACGTTGAGATGCAACATCTCAAGCGCTGGAACCCGC GCACAGGCCAGGCGCTTAAGCCAGGGCAGATGCTGGTGGTTTCCGGGCCACGCTAA Protein sequence : MSSSIRKSNHSDALTRLAQAVAVAVSATLAGCQSSSFTAQSTVHPKPNLSAKIKQKPVIWLSEKPAPEVPQDVWERMRRG FQLQEGLGVNPRIEQQRLWFASNPSFLENAGERGSLYIHYIVERLEERNMPLELALLPVIESAYNPMAYSRSDAVGLWQF IPSTGRYFNLRQTRAYDGRRDITASTTAALDYLTRLHDMFNGDWLLALAAYNAGEGTVSRAIERNEKLGLPTDYWNLPLP QETKDYVPKFLALSQVVLAPEAYGVNLNPIANTPYFEVVEVKQSMDLSRVAALAEIDEDELFQLNPALKQRTTLDGPQHL LVPSSKAQLLTSTLSTMKPEELLAMRPKKQVFDEVETARVAGRSRSYKVRSGDNLTLIAKANKVDVHDLQRWNKLNGQAL KVGQTLVMQDTRKLVAKADSKKPVQYKVKKGDSLYIVAKRFNVEMQHLKRWNPRTGQALKPGQMLVVSGPR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAT96217.1 | membrane-bound lytic murein transglycosylase-like protein | Not tested | T-PAI | Protein | 7e-82 | 53 |
| unnamed | AAT96163.1 | membrane-bound lytic murein transglycosylase-like protein | Not tested | T-PAI | Protein | 8e-82 | 52 |
| celORF1 | AAP31244.1 | conserved effector locus ORF1 | Not tested | Hrp PAI | Protein | 5e-84 | 50 |
