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Name : rnhA (PFLU2645) Accession : YP_002872231.1 Strain : Pseudomonas fluorescens SBW25 Genome accession: NC_012660 Putative virulence/resistance : Unknown Product : ribonuclease H Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0328 EC number : 3.1.26.4 Position : 2917677 - 2918129 bp Length : 453 bp Strand : + Note : An endonuclease that specifically degrades the RNA strand of RNA-DNA hybrids DNA sequence : ATGACCGATAGCGTAGAACTCTTCACCGATGGCGCCTGCAAAGGCAACCCGGGCCCTGGCGGCTGGGGCGCGTTGCTGGT GTGCAAGGGCGTGGAGAAAGAGTTGTGGGGCGGTGAAGCCAACACCACCAACAACCGCATGGAACTGATGGGCGCCATTC GTGGCCTGGAAGAACTCAAGCGCCGCTGCAACGTGCTGCTGGTGACCGACTCGCAATACGTGATGAAGGGCATCAACGAG TGGATGGTCAACTGGAAGAAGCGTGGCTGGAAGACTGCGGCCAAGGAACCGGTGAAAAATGCCGACCTGTGGCAGCTGCT GGACGAGCAATGCAATCGCCATGACATCACCTGGAAATGGGTGCGCGGTCACATCGGCCACCCTGGCAACGAGCGCGCGG ACCAGCTGGCCAACCGGGGCGTGGACGAAGTGCGCGGCTACAAGCAGAGCTGA Protein sequence : MTDSVELFTDGACKGNPGPGGWGALLVCKGVEKELWGGEANTTNNRMELMGAIRGLEELKRRCNVLLVTDSQYVMKGINE WMVNWKKRGWKTAAKEPVKNADLWQLLDEQCNRHDITWKWVRGHIGHPGNERADQLANRGVDEVRGYKQS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| rnhA | AAO17224.1 | RnhA | Not tested | tcd island | Protein | 1e-36 | 59 |
