Gene Information

Name : PFLU3548 (PFLU3548)
Accession : YP_002873110.1
Strain : Pseudomonas fluorescens SBW25
Genome accession: NC_012660
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : S : Function unknown
COG ID : COG3516
EC number : -
Position : 3935018 - 3935515 bp
Length : 498 bp
Strand : -
Note : -

DNA sequence : 
ATGGCCAAAGAAGGTTCGGTAGCCCCCAAGGAACGTATCAATATCACGTTCAAACCCGCCATCGGCGGGGCGCAGGAAGA
AGTCGAACTGCCGTTGAAACTATTGGTGCTGGGAGATTTCACCCAACGTGAGGACGCGCGCAAGCTTGAAGATCGCAAAC
CCATCGCGATCGACAAAAACACCCTTGATGACGTGCTGGCCAAACAGGCGTTGAGCCTGACGCTGAATGTGCCCAATCGT
CTGCAGGAGGATGCGCACGTTGAGGAGCTGGCCATTCAGGTACGCATTAACGCCATGAAGGATTTCAATCCCGCGAACCT
GGTTGAGCAGGTTCCGGAGTTGCACAAGCTGATGGCGTTGCGCGAGGCACTGATGGCTCTCAAGGGCCCACTGGGCAACA
CCCCGAGCTTTCGCAAGGCCATCGAACAGGCCCTGGCCGATGACGAGTCCCGCGCGCGGGTACTGGCCGAGCTGGGCCTG
GGCAGCCCGGACGCCTGA

Protein sequence : 
MAKEGSVAPKERINITFKPAIGGAQEEVELPLKLLVLGDFTQREDARKLEDRKPIAIDKNTLDDVLAKQALSLTLNVPNR
LQEDAHVEELAIQVRINAMKDFNPANLVEQVPELHKLMALREALMALKGPLGNTPSFRKAIEQALADDESRARVLAELGL
GSPDA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
HH0248 NP_859779.1 hypothetical protein Not tested HHGI1 Protein 4e-25 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PFLU3548 YP_002873110.1 hypothetical protein VFG2092 Protein 6e-32 51
PFLU3548 YP_002873110.1 hypothetical protein VFG2474 Protein 2e-31 50