Gene Information

Name : PFLU3568 (PFLU3568)
Accession : YP_002873130.1
Strain : Pseudomonas fluorescens SBW25
Genome accession: NC_012660
Putative virulence/resistance : Virulence
Product : putative RNA polymerase sigma factor
Function : -
COG functional category : K : Transcription
COG ID : COG1595
EC number : -
Position : 3954113 - 3954619 bp
Length : 507 bp
Strand : -
Note : -

DNA sequence : 
GTGATCTGCATGTCGTCTTCGCTCAATCTGCCTGTCGAGGCGCTGTACTGCGAACACCACGGATGGTTATACCGCTGGCT
CGACCGCAAGTTGGGCAACGCCAGCGATGCGGCCGACCTGGCCCACGACACCTTCATGCGCCTGCTCACCCGGCAGCACA
GTGCGGGTTTCGGCAGCGAGCCGCGTGCGTTGCTTACCCACATCGCCAAGGGCTTGATGATCGACAGTTGGCGCCGCCAG
GAAGTCGAGCGCGCTTATCTGGAAACCATTGCCCACTTGCCGGAGCAGGAGGTGCCGTCGCCGGAAACCCGCTGGCTGAT
TCTTGAGGCGCTGTACCGCATCGAAGCCATGCTGCGCGATTTGCCGGACAAGACCCGCCAGGCCTTCCTGATGTCGCAGA
TCGATGGCCTGACGTACGCGCAGATCGCCGAGGAATTGAAGGTGTCGCTGGTCTCGGTCAAACGCTACATGCGCGATGCG
TTCCTGGCATGCCTGAGCGTGGCATGA

Protein sequence : 
MICMSSSLNLPVEALYCEHHGWLYRWLDRKLGNASDAADLAHDTFMRLLTRQHSAGFGSEPRALLTHIAKGLMIDSWRRQ
EVERAYLETIAHLPEQEVPSPETRWLILEALYRIEAMLRDLPDKTRQAFLMSQIDGLTYAQIAEELKVSLVSVKRYMRDA
FLACLSVA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL08458.1 FecI Virulence SRL Protein 1e-31 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PFLU3568 YP_002873130.1 putative RNA polymerase sigma factor VFG1049 Protein 5e-32 48