Gene Information

Name : PFLU3749 (PFLU3749)
Accession : YP_002873304.1
Strain : Pseudomonas fluorescens SBW25
Genome accession: NC_012660
Putative virulence/resistance : Virulence
Product : putative RNA polymerase sigma factor
Function : -
COG functional category : K : Transcription
COG ID : COG1595
EC number : -
Position : 4147628 - 4148170 bp
Length : 543 bp
Strand : -
Note : -

DNA sequence :

ATGCATGACATTCCGGCCGCGCTGGGCGACTCCGTCCGGCAGCAGACCCTTACGGCGATGTACAGCGAGCACCACGGCTG
GTTGCACGGCTGGCTGCGCAAGAAACTCGGGTGCTCCCAGCATGCCGCCGACCTGGCCCACGACGCGTTCATCCGCGTAC
TGATGCTGGCCGAACCGCAAAACATCAAGGAACCTCGCGCCTTCCTCGCCACCACGGCAGGGCGGTTGTTGATCGACGGC
GCTCGTCGCCGCCGCATCGAAAAAGCCTACCTGGAAGCCCTGGTGATCCAGTGCGCAGACGCCGGCATGCCCGACCCAGC
CGCGATTCATGTGGCGTTGCAAGCCCTGGAACGCATCGCCGAGATGCTCGCCGGCCTGCCTGCCAACGCCCGCGAAGCGT
TCCTGCTGAGTCGCCTTGATGGCCTGACCTACAGCGAAATCGCCACGCGCCTGGACGTGTCCTCCAGCACCGTCAAAAAC
TATATCTCCAGCGCCCTGGTGCATTGCTACCACAGCCTGCACCCGGCAGACCCGCTGGTATGA

Protein sequence :

MHDIPAALGDSVRQQTLTAMYSEHHGWLHGWLRKKLGCSQHAADLAHDAFIRVLMLAEPQNIKEPRAFLATTAGRLLIDG
ARRRRIEKAYLEALVIQCADAGMPDPAAIHVALQALERIAEMLAGLPANAREAFLLSRLDGLTYSEIATRLDVSSSTVKN
YISSALVHCYHSLHPADPLV

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
unnamed	AAL08458.1	FecI	Virulence	SRL	Protein	7e-35	47

• Homologs from VFDB (virulence genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
PFLU3749	YP_002873304.1	putative RNA polymerase sigma factor	VFG1049	Protein	3e-35	47