Gene Information

Name : PFLU5564 (PFLU5564)
Accession : YP_002875059.1
Strain : Pseudomonas fluorescens SBW25
Genome accession: NC_012660
Putative virulence/resistance : Virulence
Product : putative alcohol dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1454
EC number : -
Position : 6092265 - 6093413 bp
Length : 1149 bp
Strand : -
Note : -

DNA sequence : 
ATGAGTACCTCCTCATTCAAGATCGCCCACAAACTGCTCACCGGCGCTGGCGCCATCGAACAACTGGCCTTTGAGCTCAC
CCGCCTGGATGTGGACAACCCGCTGATCGTCACCGACGCCGCGCTGGTCAAGTCCGGCACCGTGGCGCTGGCACTCGAGC
ACCTGGGCGAACGCAGCTACGAGATTTTCGACCGCGTCCTGCCCGACCCGGAAATCGCCATCGTCGAGGACTGCATGCGT
GTCTACCGCGAGGGTGGTCATGACGGCTTGATCGGCCTGGGCGGCGGCAGCGCCATCGATATCGCCAAAAGCGTTGCCGC
CTATGCCGGATACCACGGCGCGCTGGCGGACTTGTTTGGCGTCGACCAAGTGCCGCGCAAGGGCCCGCCGCTGATTGCCA
TCCCGACCACGGCGGGCACCGGCTCGGAAGTGACCAATGTGGCGATCCTCTCCGACAAGGCCGCGCAGCTGAAAAAAGGC
ATTGTCAGCGACTACCTGCTGCCGGACGTCGCGCTGATCAGCCCGCAAATGACCCTGACCTGCCCGCGCAGCGTCACCGC
CGCCAGCGGCGTGGATGCGCTGGTGCATGCCATCGAATCCTACCTGTCGCTGAATGCTTCGCCGATCACCGACGCGCTGG
CCATCGGCGCCATCAAGCTGATCGCCAAGGCGTTGCCCAAGGCCTACGCGAACCCCGCGAACCTGCAGGCGCGAGACGAT
ATGGCCACCGCCAGCCTGATGGCCGGTATGGCGTTCGGGAATGCCGGGGTGGGCGCGGTGCATGCGTTGGCGTACCCGCT
GGGTGGGCGTTTCAATATTGCCCATGGTGTGAGCAACGCGCTGTTGCTGCCCTATGTGATGCACTGGAACAAGCTGGCCT
GTGTGGAGCGTATGCAGGACGTTGCGCAGGCCATGGGCGTGAATGTCGCCGGCTTGAGCGTCAATGATGCCGCCGACCAA
GCTGTCGAGGCCATGACGCGACTGTGTGCCGCAGTAGATATCCCGGCGGGCCTGCGCAGTTTCGGGGTGCCCGAGGACGC
GATCCCCGCCATGGCCGTGGAGGCGGCGGGCATTGAACGGTTGATGCGCAACAATCCGCGCAAGCTCAGCGCGGCGGATA
TCGAGAAAATCTATCGGGCTGCGTACTAG

Protein sequence : 
MSTSSFKIAHKLLTGAGAIEQLAFELTRLDVDNPLIVTDAALVKSGTVALALEHLGERSYEIFDRVLPDPEIAIVEDCMR
VYREGGHDGLIGLGGGSAIDIAKSVAAYAGYHGALADLFGVDQVPRKGPPLIAIPTTAGTGSEVTNVAILSDKAAQLKKG
IVSDYLLPDVALISPQMTLTCPRSVTAASGVDALVHAIESYLSLNASPITDALAIGAIKLIAKALPKAYANPANLQARDD
MATASLMAGMAFGNAGVGAVHALAYPLGGRFNIAHGVSNALLLPYVMHWNKLACVERMQDVAQAMGVNVAGLSVNDAADQ
AVEAMTRLCAAVDIPAGLRSFGVPEDAIPAMAVEAAGIERLMRNNPRKLSAADIEKIYRAAY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42074.1 hypothetical protein Not tested PAI II 536 Protein 1e-25 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PFLU5564 YP_002875059.1 putative alcohol dehydrogenase VFG1593 Protein 5e-26 41