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Name : clpB2 (PFLU6025) Accession : YP_002875509.1 Strain : Pseudomonas fluorescens SBW25 Genome accession: NC_012660 Putative virulence/resistance : Virulence Product : chaperone Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 6586079 - 6588742 bp Length : 2664 bp Strand : + Note : - DNA sequence : ATGGGTGAAATCAGTCGCGCCGCACTGTTCGGCAAACTCAACAGCGTGGCCTACAAGGCCATCGAAGCCGCCACGGTGTT CTGCAAACTGCGGGGCAACCCGTATGTGGAGCTTGCCCACTGGTTTCACCAGTTGCTGCAACTGCAGGACTCGGACCTGC ACCGCATCATCCGCCAGTTCAACGTCGAGCCGGCGCGCCTGGCCCGCGACCTGACTGAAGCCCTGGACCGCCTGCCACGC GGCTCGACCTCGATCACCGACCTGTCCTCCCATGTGGAAGAAGCGGTGGAGCGCGGCTGGGTCTACGGCAGCCTGATGTT CGGCGAAAGCCAAGTACGCACCGGTTATCTGGTGCTCGGCATTCTCAAGACCCCGAGCCTGCGCCATGCGCTGCTGGGCT TGTCTTCCGAGTTCGACAAGATCAAGGCCGAGGCCCTGAGCGAGCGCTTTGATGAATACGTGGGCGACTCGCCGGAAAAC GCGCTGAGCGCCAGCGACGGTTTCAACGCCGGCGCCGTGCCGGGCGAAGCCAGCGGTGCCATGGCGCCCAGTGCGATGGG CAAACAGGAAGCGCTCAAGCGCTTCACCGTTGACCTGACCGAACAGGCCCGCAGCGGCAAGCTCGACCCGATCGTGGGTC GTGATGAGGAGATCCGCCAACTGGTCGACATCCTCATGCGCCGCCGCCAGAACAACCCGATCCTCACCGGTGAAGCCGGG GTGGGCAAGACCGCCGTGGTCGAAGGTTTCGCCCTGCGTATCGTCGCCGGTGACGTGCCACCCGCGCTCAAAGATGTGGA ACTGCGCAGCCTCGACGTGGGCCTGCTGCAAGCCGGCGCCAGCATGAAAGGCGAATTCGAACAGCGCCTGCGCCAGGTCA TTGAAGACGTCCAGGCCTCACCCAAGCCGATCATCCTGTTTATCGACGAAGCCCACACCCTGGTGGGTGCCGGTGGCGCC GCCGGCACCGGTGACGCAGCCAACCTGCTCAAGCCTGCATTGGCGCGTGGCACCCTGCGTACTGTGGCCGCCACCACCTG GGCCGAGTACAAGAAGCACATCGAGAAAGACCCGGCCCTGACGCGCCGTTTCCAGGTGGTGCAAGTCGCCGAACCGTCGG AAGACAAAGCGCTGCTGATGATGCGTGGCGTGGCGTCGACCATGGAAAAACACCACCAGGTGCAGATCCTCGACGAAGCC CTGGAAGCCTCGGTGAAGCTGTCCCACCGCTACATCCCGGCGCGCCAGTTGCCGGACAAATCCGTAAGCCTGCTGGACAC CGCTTGCGCCCGCGTCGCCATCAGCCTGCACGCGGTGCCGGCCGAAGTGGACGACAGCCGCCGCCGCATCGAAGCCCTGG AAACCGAGCTGCAGATCATCGCTCGCGAGCATGCCATTGGTATCGCGATTGGCGCGCGTCAAACCAATAGCGAAGCACTG TTGAGCGCTGAACGTGAGCGCCTGGCGACGCTGGAAAGCCGCTGGGCCGAAGAGAAAGCGCTGGTGGACGAACTGCTCGC TACCCGCGCGACCTTGCGCGAAAAAGCCGGCGCCGTAGACAGTGGCGACGACGCTTTGCGCGAGCAACTGGTCGACCTGC AACAACGCCTCAGCGCGCTGCAAGGTGAAACCCCGCTGATCCTGCCGACGGTGGACTACCAGGCCGTGGCCTCGGTGGTC GCCGACTGGACCGGCATCCCGGTGGGCCGCATGGCGCGCAATGAGCTGGAGACGGTGCTCAACCTCGACCAGCACCTGAA GAAACGCATCATCGGCCAGGACCACGCCCTGCAGATGATCGCCAAGCGCATCCAGACGTCCCGCGCCGGTCTCGACAACC CGAGCAAGCCGATTGGCGTGTTCATGCTGGCCGGCACCTCGGGCGTGGGCAAGACCGAAACCGCCCTGGCCCTGGCCGAA GCCATGTACGGCGGCGAGCAGAACGTCATCACCATCAACATGAGCGAATTCCAGGAAGCCCACACGGTGTCGACCCTCAA GGGCGCGCCTCCGGGCTATATCGGCTACGGCGAAGGCGGCGTGCTGACCGAAGCCGTGCGGCGCAAACCCTACAGCGTGG TACTGCTGGACGAGGTGGAGAAAGCCCACCCGGACGTGCATGAAATCTTCTTCCAGGTGTTCGACAAGGGCGTGATGGAA GACGGCGAAGGCCGGGTGATCGACTTCAAGAACACCCTGATCCTGCTGACCACCAACGCCGGTACCGAGCTGATTTCCCA GGTGTGCAAAGACCCGGCGAACATCCCTGAGCCGGAAGAAATCGCCAAGGCCCTGCGCCAGCCGCTGCTGGAGATCTTTC CGCCGGCACTGCTCGGCCGCCTAGTGACCATTCCGTACTACCCGCTGAGCGATGAGATGCTCAAGGCGATCACCCGCCTG CAACTGGGTCGCATCAAGAAGCGCGTGGAGACGACCCACAAGGTTGCCTTCGACTACGACGACGCGGTGGTCGACCTGAT CGTCTCGCGTTGCACCGAAACCGAAAGCGGCGGGCGCATGATCGACACCATTCTTACCAACAGCCTGCTGCCGGACATGA GCCGTGAGTTCCTCACGCGCATGCTCGAAGGCAAGGCGATGGCGGGTGTACGCATCAGCAGCCGGGATAATGAATTGCAC TACGACTTCAGCGACGCAGATTGA Protein sequence : MGEISRAALFGKLNSVAYKAIEAATVFCKLRGNPYVELAHWFHQLLQLQDSDLHRIIRQFNVEPARLARDLTEALDRLPR GSTSITDLSSHVEEAVERGWVYGSLMFGESQVRTGYLVLGILKTPSLRHALLGLSSEFDKIKAEALSERFDEYVGDSPEN ALSASDGFNAGAVPGEASGAMAPSAMGKQEALKRFTVDLTEQARSGKLDPIVGRDEEIRQLVDILMRRRQNNPILTGEAG VGKTAVVEGFALRIVAGDVPPALKDVELRSLDVGLLQAGASMKGEFEQRLRQVIEDVQASPKPIILFIDEAHTLVGAGGA AGTGDAANLLKPALARGTLRTVAATTWAEYKKHIEKDPALTRRFQVVQVAEPSEDKALLMMRGVASTMEKHHQVQILDEA LEASVKLSHRYIPARQLPDKSVSLLDTACARVAISLHAVPAEVDDSRRRIEALETELQIIAREHAIGIAIGARQTNSEAL LSAERERLATLESRWAEEKALVDELLATRATLREKAGAVDSGDDALREQLVDLQQRLSALQGETPLILPTVDYQAVASVV ADWTGIPVGRMARNELETVLNLDQHLKKRIIGQDHALQMIAKRIQTSRAGLDNPSKPIGVFMLAGTSGVGKTETALALAE AMYGGEQNVITINMSEFQEAHTVSTLKGAPPGYIGYGEGGVLTEAVRRKPYSVVLLDEVEKAHPDVHEIFFQVFDKGVME DGEGRVIDFKNTLILLTTNAGTELISQVCKDPANIPEPEEIAKALRQPLLEIFPPALLGRLVTIPYYPLSDEMLKAITRL QLGRIKKRVETTHKVAFDYDDAVVDLIVSRCTETESGGRMIDTILTNSLLPDMSREFLTRMLEGKAMAGVRISSRDNELH YDFSDAD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 0.0 | 53 |
| aec27 | YP_851418.1 | ATPase | Not tested | PAI II APEC-O1 | Protein | 7e-134 | 41 |
| aec27 | AAQ96721.1 | Aec27 | Not tested | AGI-1 | Protein | 5e-134 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpB2 | YP_002875509.1 | chaperone | VFG2076 | Protein | 0.0 | 88 |
| clpB2 | YP_002875509.1 | chaperone | VFG2084 | Protein | 1e-153 | 44 |
| clpB2 | YP_002875509.1 | chaperone | VFG0079 | Protein | 1e-105 | 41 |
