Gene Information

Name : PFLU6130 (PFLU6130)
Accession : YP_002875612.1
Strain : Pseudomonas fluorescens SBW25
Genome accession: NC_012660
Putative virulence/resistance : Virulence
Product : putative iron-related RNA polymerase sigma factor
Function : -
COG functional category : K : Transcription
COG ID : COG1595
EC number : -
Position : 6713950 - 6714468 bp
Length : 519 bp
Strand : +
Note : -

DNA sequence :

TTGTCATGCCCTATGTCCCCTTCCTCACACACGGCTGCGGTCCAGAACATCTATGAGCAGCACCATTCCTGGCTGCATGG
GTGGCTCAAAGGTAAGTTGCATAACGCCTGCGATGCGGCCGATGTGGCGCACGATACGTTCGTGCGCATCCTGGGCGGGC
GGCATGCGGCGCAGATCGTTGAACCGCGTGACTATTTGGCGACCATCGCCAGAGGCCTGGTGATTGATCGTTACCGTCGG
CACGCCATCGAACAGGCTTACAAGCAGACCTTGGCCGAACGGCCTGAAGCGAATGCCATCAGCGAAGAAGATAAAGCCAT
CATCCTCGAGACGTTAGTGGCTGTGGATAAAGCCTTGTCTGCACTCGGTGAGCGGGCCCGGCGGATTTTCATGCTGTCGC
AGATCGAGGGGCTGACTTATCAACAGATTGCCGATCAGCTCCAGGTGTCACTGACCACGGTGAAGAAGCATATGATCCGT
GCATTGACTGAATGCTCGCTGATCATGGCCAGCTTGTAA

Protein sequence :

MSCPMSPSSHTAAVQNIYEQHHSWLHGWLKGKLHNACDAADVAHDTFVRILGGRHAAQIVEPRDYLATIARGLVIDRYRR
HAIEQAYKQTLAERPEANAISEEDKAIILETLVAVDKALSALGERARRIFMLSQIEGLTYQQIADQLQVSLTTVKKHMIR
ALTECSLIMASL

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
unnamed	AAL08458.1	FecI	Virulence	SRL	Protein	1e-32	41

• Homologs from VFDB (virulence genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
PFLU6130	YP_002875612.1	putative iron-related RNA polymerase sigma factor	VFG1049	Protein	5e-33	41