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Name : rscT (PFLU0717) Accession : YP_002870382.1 Strain : Pseudomonas fluorescens SBW25 Genome accession: NC_012660 Putative virulence/resistance : Virulence Product : putative type III secretion protein Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG4791 EC number : - Position : 821326 - 822114 bp Length : 789 bp Strand : + Note : - DNA sequence : GTGCTGCTCTATCTCGAGTATTTGCCCAGCCTGGTGATCGGCATGGCGCGGATCTACCCCTGCGGCATCCTGGTGGCAGC GTTCTGTTTCCAGCATATACGGGGCATGCCGCGCCATACCCTCGTGATGGTCTTGGCATTGATGCCTGCGCCGGGTATCT ATGCGGCGTTGGCAGGCCAGGATTACTCCGCGATTCTATTGGGGGCGCTGGTGCTCAAGGAGGTGGCCTTGGGGGTTCTA CTGGGCGTGCTGCTGGCGATGCCGTTCTGGATGTTCGAGTCAGTGGGGGCGCTGCTGGATAACCAACGCGGCGCTTTGGC TGGCGGCCAGCTCAACCCCTCGTTGGGGCCGGATGCGACGCCGATTGGACACTTGTTCAAGCAACTGGCGATTTTCCTGT TGATGGTGAGCCTGGGGTTGGGCACGTTGACCCAGGTGATCTGGGACAGCTACCTGATCTGGCCTCCCACCGCATGGTTC CCGCTGCCGGCGGCGAATGGCATGAGCGTGTTCATCGACCTGTTGGGTGACACCTTCACGCACATGTTGCTCTACGCCGC GCCCTTTATCGCAGTGTTGCTGTTGCTGGAGTTCGGCATCGCGCTGCTGGGCGTCTACAGTCAGCAATTGCAGGTCAGCA CGCTGGCGCCACCGGTCAAAAGCCTGGCGGGTATCGGCATCCTTCTTCTCTACTTTGCGCTGCTGCAGGACCTGATCGTC GGGCGTATGAGCCTGCTGGGCGACCTGAAACACTCACTCGGGCTATTGATCAAGGTTGCAATCCCATGA Protein sequence : MLLYLEYLPSLVIGMARIYPCGILVAAFCFQHIRGMPRHTLVMVLALMPAPGIYAALAGQDYSAILLGALVLKEVALGVL LGVLLAMPFWMFESVGALLDNQRGALAGGQLNPSLGPDATPIGHLFKQLAIFLLMVSLGLGTLTQVIWDSYLIWPPTAWF PLPAANGMSVFIDLLGDTFTHMLLYAAPFIAVLLLLEFGIALLGVYSQQLQVSTLAPPVKSLAGIGILLLYFALLQDLIV GRMSLLGDLKHSLGLLIKVAIP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hrcT | ABA47281.1 | HrcT | Virulence | S-PAI | Protein | 7e-47 | 55 |
| hrcT | AAG33886.1 | HrcT | Virulence | Hrp PAI | Protein | 6e-46 | 54 |
| hrcT | NP_791220.1 | type III secretion protein HrcT | Virulence | Hrp PAI | Protein | 8e-46 | 54 |
| hrcT | ABQ88361.1 | HrcT | Virulence | Hrp PAI | Protein | 5e-47 | 54 |
| hrpX | AAB05077.1 | HrpX | Virulence | Hrp PAI | Protein | 5e-47 | 54 |
| hrcT | AAT96345.1 | HrcT | Virulence | S-PAI | Protein | 5e-46 | 54 |
| hrcT | AAT96148.1 | HrcS | Virulence | T-PAI | Protein | 3e-46 | 53 |
| hrcT | AAT96202.1 | HrcT | Virulence | T-PAI | Protein | 3e-46 | 53 |
| hrcT | AAB06007.1 | HrcT | Virulence | Hrp PAI | Protein | 4e-36 | 53 |
| hrcT | AAT96305.1 | HrcT | Virulence | S-PAI | Protein | 7e-46 | 53 |
| hrcT | AAT96264.1 | HrcT | Virulence | S-PAI | Protein | 7e-46 | 53 |
