|
Name : VCD_002107 (VCD_002107) Accession : YP_002877844.1 Strain : Genome accession: NC_012668 Putative virulence/resistance : Unknown Product : DNA polymerase III subunit epsilon Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0847 EC number : 2.7.7.7 Position : 1205900 - 1206643 bp Length : 744 bp Strand : + Note : 3'-5' exonuclease of DNA polymerase III DNA sequence : ATGAATACTAGCAACAATGCAGAATACCAACGCATCGTGGTGCTCGATACCGAAACCACGGGTATGAACCGCGAAGGCGG CCCCCATTACGAGGGACATCGAATTATTGAGATCGGTGCAGTTGAAATTATCAACCGTAAACTCACCGGACGGCATTTTC ACGTCTACTTAAAACCAGATCGCGATATTCAATTAGAGGCGATTGAAGTTCACGGTATTACCGATGAGTTTCTAAAAGAT AAGCCCGAGTACAAAGATGTCCATGAGGAGTTTGTAGACTTCATCAAAGGGGCCGAGCTGGTTGCCCACAATGCACCGTT TGACGTCGGCTTTATGGATTACGAGTTTGCTAAACTCGGTGGTGCGATCGGTAAAACCAGCGATTTTTGCAAAGTGACCG ATACTTTGGCGATGGCCAAGCGGATTTTCCCCGGTAAACGCAATAACTTGGATATCTTGTGTGAGCGTTACGGCATTGAT AACTCACACCGAACCCTGCACGGCGCTTTGCTCGATGCGGAGATTCTAGCCGACGTTTATCTATTGATGACCGGTGGGCA GACTTCACTGCAATTTTCATCGGTCACGCAAAATAGTGGGGAATTGAGCGCAGAATCGTTAAAACGTGCTCGTTCAGAGC GAAAAGCGTTAAAGGTTTTAGCGGCTAGCGCCGATGAACTACAAGCACATCAAGATCGTTTGGACATAGTGGCCAAAAGT GGCACTTGCCTATGGCGTAGTTAG Protein sequence : MNTSNNAEYQRIVVLDTETTGMNREGGPHYEGHRIIEIGAVEIINRKLTGRHFHVYLKPDRDIQLEAIEVHGITDEFLKD KPEYKDVHEEFVDFIKGAELVAHNAPFDVGFMDYEFAKLGGAIGKTSDFCKVTDTLAMAKRIFPGKRNNLDILCERYGID NSHRTLHGALLDAEILADVYLLMTGGQTSLQFSSVTQNSGELSAESLKRARSERKALKVLAASADELQAHQDRLDIVAKS GTCLWRS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| dnaQ | AAO17223.1 | DnaQ | Not tested | tcd island | Protein | 4e-77 | 66 |
