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Name : VCD_002898 (VCD_002898) Accession : YP_002878628.1 Strain : Genome accession: NC_012668 Putative virulence/resistance : Virulence Product : RTX toxin transporter Function : - COG functional category : V : Defense mechanisms COG ID : COG2274 EC number : - Position : 2095700 - 2097313 bp Length : 1614 bp Strand : + Note : - DNA sequence : GTGGTGATGGATAAAGTGCTGGTCCACCAAGCTTGGTCGACGTTGGATGTACTGGTATTTGGTCTAGTGATTACAGGGGT GATCGAAGTGGTGTTACGCGGATTGCGCGAATATCAGTATGCCCATACCGCCAACCGAATTGACATACAGCTTGGACTCA AACTGGTGCAGCATCTGTTTGGACTGCCGCTCATGTTTTTTAAATCACGCCAAGTCGGCGCGATTGTCACGCGTGTGCGC GAGCTCGACACCATTCGCGAGTTTTTGACTGGCTCTATGTTTACCTTAACGGTCGAGCTACTGTTTATGTTCGTCTTTCT TTACGTCATGAGCTTACTTTCTGCTCCGCTCACAGGGCTATTTATCGCTACTGTGCCCTGTTATGTCCTTCTCGCTTGGT GGCTCACACCAAGAATGCAGGCGGCGATTGAAAAGCAGTTTTCACATGCTGCGGCAAATACCTCATTTCTCACTGAAACC GTAGCCGGTAGTGAAACGCTGAAAAGTTTGGCGGTTGAGCCGCGATTTATCCGACGCTGGGATGAACAAACCGAAAAAAT GGTCACAACGGGTTATGACGTCCAGCAGCTTAATAACCGTTCTAACCATTTAGTGCAGTTGCTGCAAAAAATCACCAGCG TCGCCATTTTATGGTTGGGGGCGACGGAAGTGCTCTCACTTGAGATGACCATTGGTCAACTGATCGCTTTCAACATGATG ACCAACCACATTGCGCAGCCCTTAGCGCGGATGGTCGAGCTGTGGGGACAATTTATTCAAACTCGGGTCGCCATCGAGAA GCTCGGCGATATGCTTAACCTACCAGTAGAACAACACACAGGGAGTGACAATGTCACTATAAGCGGCGCTATTAGTTTCA AAAACATCCTCTTTCGTTATCAACCGGATATTCCTCCTACCATTAATGATTTGTCGCTAGACATCCGTGCAGGTGAAACA TTGGGGGTGGTCGGCACCTCGGGCTCAGGCAAAAGCACCCTCGCCCGTCTGTTGTTGCGACTTTATAGCCCTGAGCAAGG CAGTATTACCATTGACGGCATTCCACTCAATCACATCAATGTTCAACAGCTCAGACAGCGAGTGGGTGTGGTATTGCAAG AGAACTTTTTATTTCACAAAAGCGTGAGTGAAAATATTGCCCAATCTAAGCCTGAGGCAAGTTTGGAAGAGATCATTGAG GCTGCAAAACTCTCGGGCGCACATGACTTCATCCTCAAACTTCCCATGGGTTACGACACGGTATTAGCAGAAGGTGGTCA ATCGCTTTCAGGTGGTCAACGGCAGCGTCTCGCGATTGCACGCACCCTTTTATCAGATCCGAAAGTGCTGATTTTGGATG AAGCAACCAGTGCGCTGGATGACGAATCTCAAGCCGTCATTCAAGCCAATATGGCCAGCATTGCCAGAGGCCGTACGGTG ATCACGATTGCTCATCGCTTGTCTACGGTGCGTGATTGCGATCGCATCATAGTGCTTCATCAGGGCACGATTGTTGAGCA AGGCTCACACCAACAATTACTCGCCTACGGCAAACAATACAAACAGTTATGGCAGCTTCAGCAAGAGCTCAAACAAGAGG AAGCCTCCGCATGA Protein sequence : MVMDKVLVHQAWSTLDVLVFGLVITGVIEVVLRGLREYQYAHTANRIDIQLGLKLVQHLFGLPLMFFKSRQVGAIVTRVR ELDTIREFLTGSMFTLTVELLFMFVFLYVMSLLSAPLTGLFIATVPCYVLLAWWLTPRMQAAIEKQFSHAAANTSFLTET VAGSETLKSLAVEPRFIRRWDEQTEKMVTTGYDVQQLNNRSNHLVQLLQKITSVAILWLGATEVLSLEMTIGQLIAFNMM TNHIAQPLARMVELWGQFIQTRVAIEKLGDMLNLPVEQHTGSDNVTISGAISFKNILFRYQPDIPPTINDLSLDIRAGET LGVVGTSGSGKSTLARLLLRLYSPEQGSITIDGIPLNHINVQQLRQRVGVVLQENFLFHKSVSENIAQSKPEASLEEIIE AAKLSGAHDFILKLPMGYDTVLAEGGQSLSGGQRQRLAIARTLLSDPKVLILDEATSALDDESQAVIQANMASIARGRTV ITIAHRLSTVRDCDRIIVLHQGTIVEQGSHQQLLAYGKQYKQLWQLQQELKQEEASA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hlyB | NP_755448.1 | hemolysin B | Virulence | PAI I CFT073 | Protein | 3e-102 | 49 |
| hlyB | CAD33760.1 | hemolysin B | Virulence | PAI I 536 | Protein | 2e-102 | 49 |
| hlyB | CAD42038.1 | HlyB protein | Virulence | PAI II 536 | Protein | 2e-102 | 49 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| VCD_002898 | YP_002878628.1 | RTX toxin transporter | VFG1501 | Protein | 1e-102 | 49 |
| VCD_002898 | YP_002878628.1 | RTX toxin transporter | VFG0907 | Protein | 1e-102 | 49 |
| VCD_002898 | YP_002878628.1 | RTX toxin transporter | VFG1557 | Protein | 1e-102 | 49 |
| VCD_002898 | YP_002878628.1 | RTX toxin transporter | VFG1269 | Protein | 3e-99 | 48 |
| VCD_002898 | YP_002878628.1 | RTX toxin transporter | VFG0841 | Protein | 8e-96 | 47 |
