Gene Information

Name : Tola_0195 (Tola_0195)
Accession : YP_002891411.1
Strain : Tolumonas auensis DSM 9187
Genome accession: NC_012691
Putative virulence/resistance : Virulence
Product : type VI secretion protein EvpB
Function : -
COG functional category : S : Function unknown
COG ID : COG3517
EC number : -
Position : 214204 - 215679 bp
Length : 1476 bp
Strand : +
Note : TIGRFAM: type VI secretion protein, EvpB/VC_A0108 family; PFAM: protein of unknown function DUF877; KEGG: pmy:Pmen_0091 hypothetical protein

DNA sequence :
ATGAAACAGAGATTAGGTGAGCAGGTTACAGCAACGCTTGAACCGGTAAATATATTAGACCGTATTATTGCGGAGACCAA
GCTGACTCCGCAGGATGAAGCCTATGACATCGCAAAACGGGGTGTCAGCGCATTTATTGAAGAGCTTCTGAAAAGTAAAT
CTTCTGCGGAACCGGTAAAAAAAGCCTTAGTCGATAAAATGATCGCGGCTATTGATGAAAAGCTCAGTCGTCAGGTAGAT
GAAATTCTGCACAATACTAAATTTCAGCAAATGGAATCGGCGTGGTGTGGGTTGAAAATGGTGGTTGATCGTACCGATTT
TGATCAGAACATTAAGCTGGAAATACTTAACGTTTCTAAAGAGGACCTGCTTGATGATTTTGAGGACGCTTCGGATATTA
CCCACTCCGGCTTATATAAACATATTTATACCTCAGAATATGGTCAGTTCGGTGGTCAGCCGGTCGGCGCTATTATTGCT
AACTATGCATTCGGACCATCCGCACCGGACGTGAAAATATTGCAATACGCCTCTTCTGTTGCTGCGATGTCTCATGCACC
TTTTATCTCTGCTGCAGGTCCTAAATTCTTTGGTCTGGAAAGTTATGAGGGTTTGCCAAACATTAAAGATCTGAACGATC
ATTTTGATGGCCCTCAGTACACCAAATGGCAGAGTTTTCGTGAAACCGAAGACAGTCGTTATGTGGGTTTGACTCTGCCT
CGTTTTCTTTTACGTCAGCCATATAGTCCTGAAGATAACCCAGTTAAAACATTTGTTTATCAGGAAGATGTATCGGCGAC
CCATGAACATTATCTATGGGGTAATTCAGCTTATGCGTTTGCTACCCGTCTGACAGAAAGTTTTGCTAAATATCGCTGGT
GTCCAAATATTATCGGCCCTCGTTCCGGTGGCGCAGTAAATGATTTGCCTCTGCATCATTTCGAAAGCATGGGGGAAATT
GAAACAAAGATTCCGACAGAGGTATTAGTTTCTGATCGCCGAGAATATCAGTTGGCTGAGCAGGGGTTCATTTCTCTGAC
AATGAGGAAAGGCTCTGATAATGCCGCTTTCTTTTCTGCTAATTCTGCACAAAAACCAAAGTTTTTTGGTAATAGCGAAG
AGGGTAAGAAAGCTGAACTTAATTACAAGCTTGGCACCCAACTGCCGTATATGTTTGTTATATGTCGTTTAGCTCATTAC
ATCAAAGTATTACAGCGTGAGCAGATTGGTTCATGGAAAGAGCGAACTCAGCTGGAAACGGAACTGAATAAGTGGCTGCG
CCAGTACATCGCTGATCAGGAAAATCCGCCAGCAGAAGTACGTAGTCGTCGCCCTCTGCGTGCGGCTCAAATCACGGTGG
AAGATGTAGATGGTGAACCGGGCTGGTACCGGGTTGGCATCGCCGTACGTCCCCATTTCAAATTTATGGGGGCAGATTTC
ACTCTTTCCCTTGTCGGTAAGCTTGATAAGGAATAA

Protein sequence :
MKQRLGEQVTATLEPVNILDRIIAETKLTPQDEAYDIAKRGVSAFIEELLKSKSSAEPVKKALVDKMIAAIDEKLSRQVD
EILHNTKFQQMESAWCGLKMVVDRTDFDQNIKLEILNVSKEDLLDDFEDASDITHSGLYKHIYTSEYGQFGGQPVGAIIA
NYAFGPSAPDVKILQYASSVAAMSHAPFISAAGPKFFGLESYEGLPNIKDLNDHFDGPQYTKWQSFRETEDSRYVGLTLP
RFLLRQPYSPEDNPVKTFVYQEDVSATHEHYLWGNSAYAFATRLTESFAKYRWCPNIIGPRSGGAVNDLPLHHFESMGEI
ETKIPTEVLVSDRREYQLAEQGFISLTMRKGSDNAAFFSANSAQKPKFFGNSEEGKKAELNYKLGTQLPYMFVICRLAHY
IKVLQREQIGSWKERTQLETELNKWLRQYIADQENPPAEVRSRRPLRAAQITVEDVDGEPGWYRVGIAVRPHFKFMGADF
TLSLVGKLDKE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aec18 YP_851426.1 hypothetical protein Not tested PAI II APEC-O1 Protein 3e-161 64
aec18 AAQ96712.1 Aec18 Not tested AGI-1 Protein 2e-161 64
HH0247 NP_859778.1 hypothetical protein Not tested HHGI1 Protein 5e-153 58

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Tola_0195 YP_002891411.1 type VI secretion protein EvpB VFG2093 Protein 1e-175 69
Tola_0195 YP_002891411.1 type VI secretion protein EvpB VFG2475 Protein 3e-169 64
Tola_0195 YP_002891411.1 type VI secretion protein EvpB VFG2070 Protein 2e-84 41