Gene Information

Name : rnhA (Tola_0911)
Accession : YP_002892125.1
Strain : Tolumonas auensis DSM 9187
Genome accession: NC_012691
Putative virulence/resistance : Unknown
Product : ribonuclease H
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0328
EC number : 3.1.26.4
Position : 995563 - 996027 bp
Length : 465 bp
Strand : -
Note : An endonuclease that specifically degrades the RNA strand of RNA-DNA hybrids

DNA sequence :
ATGCTAAAACAGATAACTCTCTATACCGATGGCTCATGTCTCGGTAACCCAGGCCCGGGCGGTTATGCCGCTGTTTTGAT
CTACAAGCAACACCGTAAAGAGTTGGCTCAGGGTTACGAGCTGACGACAAATAACCGCATGGAACTAATGGCCGCTATTG
CAGGTTTGCAATCATTAAGCGAACCCTGTCAGGTCAGATTGACCACTGACAGCCAGTATGTCCGGCAAGGTATTACCCAG
TGGATCCACGGTTGGAAGAAAAAAGGCTGGAAAACGGCTAACCGCGAACCAGTAAAAAACGTGGACTTATGGTTACTGCT
GGACAGCGAAATTCAGCGTCATGATGTGGAATGGTTTTGGGTTAAAGGTCATTCCGGTCACCCGGAAAATGAACGCTGCG
ATGAACTGGCCCGCAATGCAGCGCTGGCTGACAGCCGCCTGATTGATTCCGGATATCCATCCTAA

Protein sequence :
MLKQITLYTDGSCLGNPGPGGYAAVLIYKQHRKELAQGYELTTNNRMELMAAIAGLQSLSEPCQVRLTTDSQYVRQGITQ
WIHGWKKKGWKTANREPVKNVDLWLLLDSEIQRHDVEWFWVKGHSGHPENERCDELARNAALADSRLIDSGYPS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rnhA AAO17224.1 RnhA Not tested tcd island Protein 8e-47 66