Gene Information

Name : ckrop_0094 (ckrop_0094)
Accession : YP_002905434.1
Strain : Corynebacterium kroppenstedtii DSM 44385
Genome accession: NC_012704
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 128223 - 128990 bp
Length : 768 bp
Strand : -
Note : -

DNA sequence : 
ATGTCCTCTACTCCAGCCGACGCCAACGCCCCGATTGCCCGGGCTGACGCCATTTCCAAGTACTACGGCAAAGGCGACAC
CCGCGTCACCGCGCTCGACTCCGTCTCCGTCGAATTCCGAACCAGGGAATTCACCGCCATCATGGGGCCCTCCGGATCAG
GAAAATCCACCCTCATGCACTGCATGGCAGGGCTCGACTCCGTCAGCGAAGGCTCCACCTTCGTCGGCGACACCGACCTC
TCCACCCTCAACGACAAACAACTCACCCGGCTCCGACGCGACCGCATCGGCTTCGTCTTCCAGTCCTTCAACCTGGTCCC
CACGCTCACTGCCTCAGAGAACATCACGCTGCCCATGGACATCGGTGGCCACCGCGTCGACAAGGAATGGTTCACGCACA
TCGTCACCTCATTCGGCCTCACGAAGCGCCTTGATCACAGGCCCTCCGAACTCTCCGGGGGCCAGCAACAACGCGTCGCC
TGCGCCCGCGCACTCATCGGCCGGCCCGACATCATCTTCGGCGACGAACCCACCGGCAACCTCGACTCCAACTCGTCCAC
CGAGGTCCTGACCACCCTCCGATCCGTCGTCGATGACTACAACCAAACCGTCGTCACCGTCACCCATGACCCCCGGGCAG
CGTCCTACGCGGACCGAGTGATCTTCCTCACCGACGGCCACATTGTCGATGAACTCACCGACCCCACCACAGAAGCCATC
CTCAGCACCATGGCCACCATCGACAACCCGGATAACCAGGCCTCATGA

Protein sequence : 
MSSTPADANAPIARADAISKYYGKGDTRVTALDSVSVEFRTREFTAIMGPSGSGKSTLMHCMAGLDSVSEGSTFVGDTDL
STLNDKQLTRLRRDRIGFVFQSFNLVPTLTASENITLPMDIGGHRVDKEWFTHIVTSFGLTKRLDHRPSELSGGQQQRVA
CARALIGRPDIIFGDEPTGNLDSNSSTEVLTTLRSVVDDYNQTVVTVTHDPRAASYADRVIFLTDGHIVDELTDPTTEAI
LSTMATIDNPDNQAS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-35 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ckrop_0094 YP_002905434.1 ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 7e-50 49
ckrop_0094 YP_002905434.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 5e-41 47
ckrop_0094 YP_002905434.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 2e-36 45
ckrop_0094 YP_002905434.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 2e-38 41