|
Name : secD (KP1_1225) Accession : YP_002918078.1 Strain : Klebsiella pneumoniae NTUH-K2044 Genome accession: NC_012731 Putative virulence/resistance : Unknown Product : preprotein translocase subunit SecD Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG0342 EC number : - Position : 1185096 - 1186943 bp Length : 1848 bp Strand : + Note : part of the preprotein secretory system; when complexed with proteins SecF and YajC, SecDFyajC stimulates the proton motive force-driven protein translocation, and appears to be required for the release of mature proteins from the extracytoplasmic side of DNA sequence : GTGTTAAACCGTTATCCTTTGTGGAAGTACGTCATGCTGGTCGTCGTCATTGTCGTCGGCCTGATCTATGCGCTTCCCAA CCTGTATGGTGAGGATCCGGCTGTTCAAATCACTGGCGCGCGCGGCGTCGCCGCCAGTGAGCAAACGCTGATCCAGGTCC AGAAAACTTTACAAGAAGAAAAAATAACCGCGAAGTCTGTGGCACTGGAAGAGGGCGCTATTCTTGCGCGCTTCGACACC ACTGATACCCAGCTGCGCGCGCGCGAAGCGCTGCTTAACGTGCTGGGTGACAAATACGTCGTGGCGCTGAACCTTGCTCC GGCAACCCCACGCTGGCTGGCGGCGCTCTATGCCGAGCCGATGAAGCTGGGTCTTGATCTGCGCGGCGGCGTGCACTTCC TGATGGAAGTCGACATGGACACCGCGTTAGGCAAACTGCAGGAACAGAACATCGATAGCCTGCGCAGCGAGCTGCGCGAC AAAGGCATTCCTTACGCGACCGTGCGTAAAGAAGACAACTACGGTCTGAGCATCGTCTTCCGCGACAGCGCGGCGCGCGA CCAGGCTATCTCTTATCTCAGCCCTCGCCATCGCGATCTGGTTATTTCCTCTCAGGGTGACAATAGACTGAAAGCGGTGA TGACCGATGAGCGCCTGAAAGAAGCCCGTGAGTACGCGGTTCAGCAGAACATTAATATCCTGCGTAACCGTGTGAACCAG CTGGGCGTCGCCGAGCCGCTGGTTCAGCGTCAGGGCGCTGACCGCATCGTGGTTGAGCTGCCGGGTATCCAGGATACCGC GCGTGCGAAGGAAATCCTTGGCGCGACCGCGACCCTCGAGTTCCGTCTGGTCAATACTAATGTGGACCAGTCCGCCGCCG CCTCTGGCCGCGTGCCGGGCGACTCGGAAGTGAAGCAGACGCGTGAAGGCCAGCCGGTAGTGCTGTACAAGCGGGTGATC CTGACCGGGGACCATATCACCGACTCGACCTCCAGCATGGATGAGTACAACCAGCCGCAGGTTAACATCTCGCTGGACAG CGCGGGCGGTAACATCATGTCTAACTTCACTAAGGACAACATCGGCAAGCCGATGGCGACCCTGTTCGTGGAGTATAAAG ACAGCGGTAAGAAAGACGCTAACGGTCGCGCTATCCTGGCGAAAGAGGAAGAGGTGATTAACATCGCCAACATCCAGTCG CGTCTGGGTAACAGCTTCCGTATCACCGGTATCAGCAATCCGAACGAAGCGCGTCAGCTGTCGCTGCTGCTGCGTGCCGG CGCGCTGATTGCGCCGATTCAGATCGTCGAAGAGCGGACTATCGGCCCAACCCTGGGAATGCAGAACATCAAGCAGGGTC TGGAAGCCTGTCTGGCCGGTCTGGTGGTCTCTATCCTGTTCATGATCCTCTTCTATAAGAAGTTCGGCCTGATTGCGACC TCGGCGCTGATTGCCAACCTGATACTGATTGTCGGCATTATGTCCCTGATCCCGGGGGCGACGCTGACCATGCCGGGCAT CGCGGGTATCGTGTTAACCCTGGCGGTGGCGGTCGATGCTAACGTTCTGATCAACGAGCGTATCAAAGAAGAGCTGAGCA ACGGGCGTACCGTTCAGCAGGCGATTGACGAAGGTTATCGCGGCGCGTTCAGCTCGATCTTCGACGCCAACGTGACGACG CTTATCAAAGTGATCATCCTGTACGCGGTCGGTACCGGTGCCATTAAAGGGTTTGCGATTACCACCGGTATCGGTATCGC GACCTCAATGTTTACCGCTATCGTCGGCACCCGTGCCATCGTGAACCTGCTGTACGGCGGCAAGCGCGTTAAAAAGCTGT CTATCTGA Protein sequence : MLNRYPLWKYVMLVVVIVVGLIYALPNLYGEDPAVQITGARGVAASEQTLIQVQKTLQEEKITAKSVALEEGAILARFDT TDTQLRAREALLNVLGDKYVVALNLAPATPRWLAALYAEPMKLGLDLRGGVHFLMEVDMDTALGKLQEQNIDSLRSELRD KGIPYATVRKEDNYGLSIVFRDSAARDQAISYLSPRHRDLVISSQGDNRLKAVMTDERLKEAREYAVQQNINILRNRVNQ LGVAEPLVQRQGADRIVVELPGIQDTARAKEILGATATLEFRLVNTNVDQSAAASGRVPGDSEVKQTREGQPVVLYKRVI LTGDHITDSTSSMDEYNQPQVNISLDSAGGNIMSNFTKDNIGKPMATLFVEYKDSGKKDANGRAILAKEEEVINIANIQS RLGNSFRITGISNPNEARQLSLLLRAGALIAPIQIVEERTIGPTLGMQNIKQGLEACLAGLVVSILFMILFYKKFGLIAT SALIANLILIVGIMSLIPGATLTMPGIAGIVLTLAVAVDANVLINERIKEELSNGRTVQQAIDEGYRGAFSSIFDANVTT LIKVIILYAVGTGAIKGFAITTGIGIATSMFTAIVGTRAIVNLLYGGKRVKKLSI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secD | AAT96067.1 | SecD | Not tested | T-PAI | Protein | 4e-119 | 48 |
| secD | AAT96119.1 | SecD | Not tested | T-PAI | Protein | 4e-119 | 48 |
| secD | AAT96179.1 | SecD | Not tested | T-PAI | Protein | 3e-119 | 48 |
| secD | AAT96103.1 | SecD | Not tested | T-PAI | Protein | 9e-120 | 48 |
| secD | AAT96039.1 | SecD | Not tested | T-PAI | Protein | 4e-119 | 48 |
