Gene Information

Name : HDEF_1320 (HDEF_1320)
Accession : -
Strain : Candidatus Hamiltonella defensa T5A
Genome accession: NC_012751
Putative virulence/resistance : Unknown
Product : 16S ribosomal RNA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1231256 - 1232804 bp
Length : 1549 bp
Strand : -
Note : -

DNA sequence : 
GAATTGAAGAGTTTGATCATGGCTCAGATTGAACGCTGGTGGCAGGCCTAACACATGCAAGTCGAGCGGCATCGAGTGAT
CGCAGTTTACTGAGTTCATGTCGGCGAGCGGCGGACGGGTGAGTAAAGTCTGGGAATCTGGCCGAAGGAGGGGGATAACT
GCTGGAAACGGCAGCTAATACCGCATGAAGTCGCGAGACCAAAGTGGGGGACCTTCGGGCCTCACGCCTTCGGATGAGCC
CAGATGAGATTAGCTGGTAGGTAAGGTAAAGGCTTACCTAGGCGACGATCTCTAGCGGGTCTGAGAGGATAGCCCGCCAC
ACTGGAACTGAGACACGGTCCAGACTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGAAAGCCTGATGCAG
CCATGCCACGTGTGTGAAGAAGGCCTTCGGGTTGTAAAGCACTTTCAGCGAGGAGGAAGCGATAAATGCGAATACCATTT
ATTTTTGACGTTACTCGCAGAAGAAGCACCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGTGCGAGCGTTAA
TCGGAATAACTGGGCGTAAAGGGCATGTAGGCGGTGAGTTAAGTCAGATGTGAAATCCCCGAGCTCAACTTGGGAATGGC
ATTTGAAACTGGGTCGCTAGAGTTTTCTAGAGGGGGGTAGAATTCCAGGTGTAGCGGTGAAATGCGTAGATATCTGGAGG
AATACCGGTGGCGAAGGCGGCCCCCTGGAGAAAGACTGACGCTGAGGTGCGAAAGCGTGGGGAGCAAACAGGATTAGATA
CCCTGGTAGTCCACGCTGTAAACGATGTCGATTTGGAGGTTGCGGTCTTGAACTGTGGCGTCCGGAGCTAACGCGTTAAA
TCGACCGCCTGGGGAGTACGGCCGCAAGGTTAAAACTCAAATGAATTGACGGGGGCCCGCACAAGCGGTGGAGCATGTGG
TTTAATTCGATGCAACGCGAAGAACCTTACCTACTCTTGACATCCACGGAATTGTGCAGAGATGCGCAAGTGCCTTCGGG
AACCGTGAGACAGGTGCTGCATGGCTGTCGTCAGCTCGTGTTGTGAAATGTTGGGTTAAGTCCCGCAACGAGCGCAACCC
TCGTCCTTTGTTGCCAGCGCGTAGAGGCGGGAACTCAAAGGAGACTGCCGGTGATAAACCGTAGGAAGGTGGGGACGACG
TCAAGTCATCATGGCCCTTACGAGTAGGGCTACACACGTGCTACAATGGCGTATACAAAGGGATGCGAACCTGCGAGGGA
AAGCGGAACTCAGAAAGTACGTCGTAGTCCGGATTGGAGTCTGCAACTCGACTCCATGAAGTCGGAATCGCTAGTAATCG
TAGATCAGAATGCTACGGTGAATACGTTCCCGGGCCTTGTACACACCGCCCGTCACACCATGGGAGTGGGTTGCAAAAGA
AGTAGGTAGCTTAACCGCAAGGAGGGCGCTTACCACTTTGTGATTCATGACTGGGGTGAAGTCGTAACAAGGTAACCGTA
GGGGAACCTGCGGTTGGATCACCTCCTTA

Protein sequence : 
-

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
FTT_r07 - 16S ribosomal RNA Not tested FPI DNA e-109 88.5
FTT_r10 - 16S ribosomal RNA Not tested FPI DNA e-109 88.5
FTW_2069 - 16S ribosomal RNA Not tested FPI DNA e-116 87.4
FTW_2070 - 16S ribosomal RNA Not tested FPI DNA e-116 87.4
FTM_1695 - 16S ribosomal RNA Not tested FPI DNA e-116 87.3
FTM_1085 - 16S ribosomal RNA Not tested FPI DNA e-116 87.3