Gene Information

Name : cspE_1 (HDEF_0233)
Accession : YP_002923149.1
Strain : Candidatus Hamiltonella defensa T5A
Genome accession: NC_012751
Putative virulence/resistance : Unknown
Product : RNA chaperone, transcription antiterminator
Function : -
COG functional category : K : Transcription
COG ID : COG1278
EC number : -
Position : 242906 - 243115 bp
Length : 210 bp
Strand : +
Note : affects expression of rpoS and uspA; COG1278

DNA sequence :
ATGACTTTAAAAAAAGGTAAGGTGAAATGGTTTGATAAAATAGCAGGTTATGGTTTTATTTCACCGGAAGATGGTGGATT
GGATATTTATGTTCATAAAGCGGCCATTGCTAACATCAAAGATAAATCATTGATTGCGGGACAAGATGTAGAGTTCTCTT
ATCGTGTTAGTTTTCATGGACCTTCTGCAGAAGATGTTATTGCTTTTTAA

Protein sequence :
MTLKKGKVKWFDKIAGYGFISPEDGGLDIYVHKAAIANIKDKSLIAGQDVEFSYRVSFHGPSAEDVIAF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAO18076.1 unknown Not tested TTSS locus Protein 1e-08 47