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Name : rtxB_1 (HDEF_0276) Accession : YP_002923189.1 Strain : Candidatus Hamiltonella defensa T5A Genome accession: NC_012751 Putative virulence/resistance : Virulence Product : ABC transporter ATP-binding protein/permease Function : - COG functional category : V : Defense mechanisms COG ID : COG2274 EC number : - Position : 275336 - 277450 bp Length : 2115 bp Strand : - Note : COG2274 DNA sequence : ATGGCCAACCACAAAAAGTCCAGCGTTCCTTCTTTACTGGCGCTTGCAAGGGGAGCCGCTTGCTTTGATTTAGCAATAGA GTCTGCCCAGTTAGAACATAAGTTGGGTTTGCCGATAGAGAAAATAGACGACATCGCTCTTTGTCGATGCGCAAATTGGA TTGGACTTCGAGCACGTAGAATTAAACAACCTGTCGCTCGATTAAACACAATGCCTTTACCTGTTTTATTTTCAGAGGGG GGAAATTGGTATTTATTATTAAATCTGAACGAAACTCATGCCGTCGTTTACTCTCCTCTTTCTGATAACGAGGGGAGTAT CTCTCGTGAGCAGCTCAATCAGTTATGGTCAGGGAAAGCCATCTTATTGGCAAAAGCAGAAAAGCCAGCCAAGAAGGCAG CTTTTGGTTTTGGCTGGTTTTTACCTTTGATTCTGAAACACGGTAGGCAGTTACGCAATATTGTTGTTATTTCTCTATTA TTACAGGCCATACTTTTGGTGACTCCTATGCTGTTTGAAACAGTCATTGATAAGGTGTTGGTCAGTCGTGGTATAGATAG CCTGATCGTATTAGGTATGGCGATGATAGGATTGGCTATTGCTGAACCTATTTATACTTTTTTGCGAGGCTGGCTATTTT CAAATCTTTCTACTCGAGTTGGAGCTGAGCTTAACACCCGTCTTTATCGTCATCTGATGAGTTTACCTTTAAACTATTTC AGCAGCAGACAAACGGGGCAAATTATTGCCAGGGTCCGTGAGATGGAGCAAATTAGAAGCTTCCTGACAGGATCAGCCTT AACCATGTTATTGGATTTATTTTTTGTCAGCACCTTTATTGCAGTCATGTTTTATTACAGCGTCAAGTTGACTTCAATTG TATTGATATCCTTGTGCTGTTACCTGGTATTTTGGCTGTGTGTGGGGAAAATTTTACAAAAAAGAGTCGAACGTGAATAT GAAGAGAGTGCCAATGCCACTTCTTTTTTAACCGAGGTGATCACGGGTCTTGAAACCATTAAAACCACGACAACAGAAAA ACAATTCAACCGTCAGTGGCAACAATATTTAGCGAATTTTGTTCGTTCGGCTTTCAATACCAAACAAGTGGGTAATTTAG CAGGCCAGGGCATTAGTTTAATTTATAAAATAACCTCCGCTTTATTACTTTGGTATGGTGTTCAGCTCGCGTTAGAAGGC AAATTGTCCCCTGGTGAGTTAGTCGCATTTAATATGTTTTCGGGTTACGTCACCCAGCCCATATTACGTTTAGCCCAAAT TTGGCAAGATTTGCAACATACAAAAATTGCATTAAAGAGAATTGGCACCATTTTAGATAGCCCAAGTGAACCCGGTAATT CAGGTTTGGTTTCATCTGCTCAGAGTGCAGGTCGTATCGCTTTTAAACAGGTTCGTTTTCGATATTCTCAGGACACACCA GAGATACTACAAAATTTGAATATATCCATAAAAAGTGGTGAATTTGTTGGAATAACAGGGCCTTCTGGTTCTGGGAAATC TACCCTGACCAAGTTATTGCAACGTTTATACACACCACAAAGCGGTCAAATTTTAGTCGATGGACAAGACCTGGCAATCA CAGATCCAACCGCTTTACGCCGCAGAATGAGTGTGGTTTTACAAGAAAGCATCTTATTTTCTGGGACAATACAGGAGAAT ATCTGTCAGTGTCGACCTAATGCTGATATGGAAGAAGTAGAAAAAGTCGCCCGTTTGGCCGGCGCTCATGATTTTATCAT GGGCTTAGCTCAGGGGTATGAAACACAGGTGGGTGAAAAAGGCGGCATGCTTTCTGGTGGGCAACGGCAACGGATTGCGT TGGCAAGAGCATTAATGGCGGATCCTCAAATTTTAATTTTAGATGAAGCGACCAGTGCCCTAGATTATGAATCAGAGGCG GCTATTATGCGTCAACTGCCTGAAATTACTCGCAATCGTACCGTTATTTGTATTGCCCACCGTCTCAATACCTTACGGGG TTGTGATCGTATTTTGTTGCTAAAAGAAGGGGTTGTTCACGAGGAAGGCACTCACAGCGAACTGGTGGAACAATCCGGCC ATTATGCGCGTTTATGGGCGCTACAAACCACTTAA Protein sequence : MANHKKSSVPSLLALARGAACFDLAIESAQLEHKLGLPIEKIDDIALCRCANWIGLRARRIKQPVARLNTMPLPVLFSEG GNWYLLLNLNETHAVVYSPLSDNEGSISREQLNQLWSGKAILLAKAEKPAKKAAFGFGWFLPLILKHGRQLRNIVVISLL LQAILLVTPMLFETVIDKVLVSRGIDSLIVLGMAMIGLAIAEPIYTFLRGWLFSNLSTRVGAELNTRLYRHLMSLPLNYF SSRQTGQIIARVREMEQIRSFLTGSALTMLLDLFFVSTFIAVMFYYSVKLTSIVLISLCCYLVFWLCVGKILQKRVEREY EESANATSFLTEVITGLETIKTTTTEKQFNRQWQQYLANFVRSAFNTKQVGNLAGQGISLIYKITSALLLWYGVQLALEG KLSPGELVAFNMFSGYVTQPILRLAQIWQDLQHTKIALKRIGTILDSPSEPGNSGLVSSAQSAGRIAFKQVRFRYSQDTP EILQNLNISIKSGEFVGITGPSGSGKSTLTKLLQRLYTPQSGQILVDGQDLAITDPTALRRRMSVVLQESILFSGTIQEN ICQCRPNADMEEVEKVARLAGAHDFIMGLAQGYETQVGEKGGMLSGGQRQRIALARALMADPQILILDEATSALDYESEA AIMRQLPEITRNRTVICIAHRLNTLRGCDRILLLKEGVVHEEGTHSELVEQSGHYARLWALQTT |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hlyB | NP_755448.1 | hemolysin B | Virulence | PAI I CFT073 | Protein | 8e-136 | 43 |
| hlyB | CAD33760.1 | hemolysin B | Virulence | PAI I 536 | Protein | 7e-136 | 43 |
| hlyB | CAD42038.1 | HlyB protein | Virulence | PAI II 536 | Protein | 7e-136 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| rtxB_1 | YP_002923189.1 | ABC transporter ATP-binding protein/permease | VFG0841 | Protein | 4e-134 | 44 |
| rtxB_1 | YP_002923189.1 | ABC transporter ATP-binding protein/permease | VFG1557 | Protein | 4e-136 | 43 |
| rtxB_1 | YP_002923189.1 | ABC transporter ATP-binding protein/permease | VFG1501 | Protein | 4e-136 | 43 |
| rtxB_1 | YP_002923189.1 | ABC transporter ATP-binding protein/permease | VFG0907 | Protein | 4e-136 | 43 |
| rtxB_1 | YP_002923189.1 | ABC transporter ATP-binding protein/permease | VFG1269 | Protein | 4e-138 | 43 |
