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Name : rtxB_2 (HDEF_0278) Accession : YP_002923191.1 Strain : Candidatus Hamiltonella defensa T5A Genome accession: NC_012751 Putative virulence/resistance : Virulence Product : ABC transporter ATP-binding protein/permease Function : - COG functional category : V : Defense mechanisms COG ID : COG2274 EC number : - Position : 278825 - 280957 bp Length : 2133 bp Strand : - Note : COG2274 DNA sequence : TTGGTTATTGAAAATCATCTTTTATCAGCTCTGGTTTGTTCTGCGCGTTTATTAAACCTGGCTGGATTGCATCCGATCAG TATTGAAAAATTTCGCAATAGTTGCCTTTTTAATGATGAAGATCGAGTGACTCAAGAACAGTTAAAAAGGAACTTAAACC AGTTTGGAAAGCTTTCTTCCGCGAAATTTCATTTGCGTTCATTAACATTAGACAAATTAAAACCCCAACACTTACCTTTG GCGTTCCGTGATAAAACGGGCCAGTTTGTGATATTAGCGGGCATAAATCAACAACAAGCTTTATTACAATACTCTAATAC ACAAAAACCGGAAATCATCAATAGATCGGAATTAGACAATCTATGGGGCGGCCTTTGTTTGTTCTGCAAGCAATCCCGTT TTGATATTCGTTGGTTTATTCCTGTTTTTCTTCGGCATCGTCGCCAATTAACCCAGGTATTATTGGTATCTTTGATGTTG CAATTATTAGCGCTGGTTGCGCCTCTGTTTTTTCAGGTGGTGATGGATAAAGTATTGGTTCACAACGCATTGGCAACGCT TGATGTGCTTGTTATCACTTTAGTGGTGGTTGGGGTCTTTGAAGTGGTGCTCAAAAGTTTACGGGAATATTTATTTGCCC ACACGACCACTCGGGTCGATATTCAACTGGGGGGGAAATTATTTCATCATTTGATTCATCTGCCTTTAAGTTACTTCAAA CAACGCCACGTGGGGAATATTGTCGCCCGAGTACGCGAGCTCGACAGCATTCGTGAATTTATTACCGGTTCTGCTTTGAC TTTATCAGTGGATGTTGTTTTTTCCGTCGTTCTTTTTACGGTGATGTGGTTTATTTCCCCTTATCTCACGCTGATTGCCT TAGCGTCTTTACCCTGTTTTGTTGTTTTGGCGTTCATGACCACAAAACCTTTACAAAAAAAAGTAGAAACACTGGCTTGC TGTGCGGCCCAAAATGGGTCTTTTTTAACGGAAACTGTAGCAGGCGTTGAAACCCTGAAAAGCTTGGCGTTAGAGCCCCG AATGCAACATCGTTGGGAGGAGCAAACATGCGATTTTGCTAAAGCGAATTTTGATGTACAGAATGTACAAAATTTCAGTA CTCAAACAGCCCAGCTGTTACAAAAATTGACCACGACCTCAGTGATTGTGTTTGGGGCTTACGAGGTCATGGGGATTCAT CTGAGTATTGGTCAATTGATCGCCTTTCATATGTTATTGGTTCAAGCCATGTTACCGATGACGAAACTGGTAGATTTGTG GCAACAAAGCATCCGTGCTCAAGTGGGATTGTCTTTATTGGCAGATATATTGACTTTACCTATGGAGAATAGTGGGTCTG GTTTTAAACCTAAAAAACCTCTTGAAGGGGCAATCAGTCTTCATAAAGTCATTTTTCGTTATCGTCCTGATCTTCCTCCC GTACTACGTGAATTGACATTACGAATTTCTTCAGGGGAGCATATTGGATTAGTTGGGCCTTCTGGATCAGGCAAAAGCAC GATAGCTCGTCTGATACAACGCCTTTATACAGCCGAACAAGGGGAGATCTTAATAGACGGAAAAAATGTTAATCAGTTCG ACGCTCATGCTTTAAGACGTCAGGTCGGAGTGGTGATGCAGGAAAATTACTTATTTAATCGCACCGTACGAGAAAATATT GCCCATGCTTTTCCTACAGCGCCTTTGGAACAGGTGGTTAAGGCCGCGTGTCTGGCAGGTGCGGATGAATTTATTCTGGC TTTACCTCTAGGATATGACACTGTTTTATCTGAAGGGGGATCTTCTCTTTCAGGAGGGCAACGTCAACGTATTGCCATCG CACGTGCGTTGTTATCGGATCCCAAAATACTGATTTTTGATGAAGCCACCAGCGCATTAGATGACGATTCTCAAAGTCAA ATCATGAAAAATATGGCAGAGATTGTGGCTAGCCGAACGGTGATCACCATTGCACATCGTTTATCTACAGTCCGTCATTG TGATCGGATTGCCGTTATTGAAGGAGGCGTGCTGACAGAATTAGCATCACATGATGAATTATTAGCCTTTAAGGGAAGCT ACTACCGTTTATGGCAACAACAAATTAACTTTAGCACTGAGGAAATGAAATGA Protein sequence : MVIENHLLSALVCSARLLNLAGLHPISIEKFRNSCLFNDEDRVTQEQLKRNLNQFGKLSSAKFHLRSLTLDKLKPQHLPL AFRDKTGQFVILAGINQQQALLQYSNTQKPEIINRSELDNLWGGLCLFCKQSRFDIRWFIPVFLRHRRQLTQVLLVSLML QLLALVAPLFFQVVMDKVLVHNALATLDVLVITLVVVGVFEVVLKSLREYLFAHTTTRVDIQLGGKLFHHLIHLPLSYFK QRHVGNIVARVRELDSIREFITGSALTLSVDVVFSVVLFTVMWFISPYLTLIALASLPCFVVLAFMTTKPLQKKVETLAC CAAQNGSFLTETVAGVETLKSLALEPRMQHRWEEQTCDFAKANFDVQNVQNFSTQTAQLLQKLTTTSVIVFGAYEVMGIH LSIGQLIAFHMLLVQAMLPMTKLVDLWQQSIRAQVGLSLLADILTLPMENSGSGFKPKKPLEGAISLHKVIFRYRPDLPP VLRELTLRISSGEHIGLVGPSGSGKSTIARLIQRLYTAEQGEILIDGKNVNQFDAHALRRQVGVVMQENYLFNRTVRENI AHAFPTAPLEQVVKAACLAGADEFILALPLGYDTVLSEGGSSLSGGQRQRIAIARALLSDPKILIFDEATSALDDDSQSQ IMKNMAEIVASRTVITIAHRLSTVRHCDRIAVIEGGVLTELASHDELLAFKGSYYRLWQQQINFSTEEMK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hlyB | NP_755448.1 | hemolysin B | Virulence | PAI I CFT073 | Protein | 6e-103 | 46 |
| hlyB | CAD33760.1 | hemolysin B | Virulence | PAI I 536 | Protein | 4e-103 | 46 |
| hlyB | CAD42038.1 | HlyB protein | Virulence | PAI II 536 | Protein | 4e-103 | 46 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| rtxB_2 | YP_002923191.1 | ABC transporter ATP-binding protein/permease | VFG1269 | Protein | 4e-109 | 48 |
| rtxB_2 | YP_002923191.1 | ABC transporter ATP-binding protein/permease | VFG1501 | Protein | 2e-103 | 46 |
| rtxB_2 | YP_002923191.1 | ABC transporter ATP-binding protein/permease | VFG0907 | Protein | 2e-103 | 46 |
| rtxB_2 | YP_002923191.1 | ABC transporter ATP-binding protein/permease | VFG1557 | Protein | 2e-103 | 46 |
| rtxB_2 | YP_002923191.1 | ABC transporter ATP-binding protein/permease | VFG0841 | Protein | 1e-100 | 45 |
