Gene Information

Name : dnaQ_1 (HDEF_0683)
Accession : YP_002923569.1
Strain : Candidatus Hamiltonella defensa T5A
Genome accession: NC_012751
Putative virulence/resistance : Unknown
Product : DNA polymerase III subunit epsilon
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0847
EC number : -
Position : 678882 - 679607 bp
Length : 726 bp
Strand : +
Note : 3'-5' exonuclease of DNA polymerase III

DNA sequence :
ATGACCCGACAAATTGTTTTGGATACTGAAACCACCGGACTAAATAAAACAGGCCCTCATTATGAGGGCCACAATATTAT
CGAGATTGGGGCGGTTGAAGTCATTAACCGTCGCCTCACAGGCAAGACTTTTCATACGTATGTGAGGCCCAACCGTCAGG
TGGATCCCGAAGCCTATCAAATTCATGGTATTAGTGATGAATTTTTATCCGATAAACCGCGCTTTTCTGAAATTTTCTCT
CAATTTTTTGAATTTATACGCGGTTCTGAATTAATCATCCATAATGCCGCTTTTGATATTGGTTTTATGGATTATGAATT
TTCGGCGCTCCAGCAAAATATCCCAAAAACAAACACTTTTTGTACGGTCACCGATACTTTAGCACTCGCCCGCCGTTTAT
TTCCTGGTAAACGCAATAGTTTAGATGCTTTATGCGATCGTTATCAGATAGATAACAGCAAACGTACTTTACACGGGGCA
TTGCTTGATGCGCAGATTTTAGCAGAAGTGTATTTAGCCATGACCGGCGGGCAAACGTTATTTTCTTTTTCAGACGAAAC
GGACGAGACAGACATTCGTAACATGACAGTGCGTCCAAAGCGGGTCAAAACTTCATCTCAATTAAAGATCATTTACGCCA
GCTGTGATGAGCTTGATGAGCATCAAGCAAGTCTGGATCTCTTAGAAAAGAAAGAAGGCTCTTGCATATGGCGATCTGCC
ACCTAA

Protein sequence :
MTRQIVLDTETTGLNKTGPHYEGHNIIEIGAVEVINRRLTGKTFHTYVRPNRQVDPEAYQIHGISDEFLSDKPRFSEIFS
QFFEFIRGSELIIHNAAFDIGFMDYEFSALQQNIPKTNTFCTVTDTLALARRLFPGKRNSLDALCDRYQIDNSKRTLHGA
LLDAQILAEVYLAMTGGQTLFSFSDETDETDIRNMTVRPKRVKTSSQLKIIYASCDELDEHQASLDLLEKKEGSCIWRSA
T

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
dnaQ AAO17223.1 DnaQ Not tested tcd island Protein 3e-75 64