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Name : secF (HDEF_0082) Accession : YP_002923005.1 Strain : Candidatus Hamiltonella defensa T5A Genome accession: NC_012751 Putative virulence/resistance : Unknown Product : preprotein translocase subunit SecF Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG0341 EC number : - Position : 83456 - 84424 bp Length : 969 bp Strand : - Note : forms a complex with SecD and YajC; SecDFyajC stimulates the proton motive force-driven protein translocation; seems to modulate the cycling of SecA by stabilizing its membrane-inserted state and appears to be required for the release of mature proteins f DNA sequence : GTGTCACAAAATTATACTGTTGAGCAACTTAATTATGGTCGTAAAGTCTACAATTTTATGCGTTGGGACAACGTGGCTTT TGGAATTTCCTTTGTATTAATGGCTGCTGCCGTTCTTATCATCTCCATCAGAGGTTTTAACTGGGGTTTGGATTTTACCG GAGGGACGGTTATCGAGATCACCATGGAACAACCTGCGCCGCTCGATCAAATACGGGATGCATTGAAAATAGCTGGTCTG GTAGGACCTGTTGTGCAAAATTTTGGTACCACTCGAGACCTGATGATACGCATGTCGGCAAAACACAATAATGCAATCCA AGAGCTCGGACAAAAGATCATTACTATTATTGATCAATCAACGAATCAAAAAACGATCCTAAAACGAGTAGAATTTGTCG GCCCCAGTGTGGGCTCAGAATTGGCGCAAACAGGAAGTATGGCATTACTGGTCGCTTTATTATCTATTCTCATTTATGTG GGCCTGCGTTTTGAGTGGCGTCTTGCATTAGGAACCGTACTTGCTTTAGGTCATGATGTAATCATTACGTTAGGTATATT GTCTTTGTTTAAAATCGAAATTGATTTAACCATTCTTGCATCATTGATGTCTGTCATCGGATATTCCTTAAATGATAGCA TTGTGGTTTCTGATCGAATTCGAGAAAATTTTCGTCAAATTCGTCGAGGAACATCCTATGAAATTATCAATGTTTCCCTT ACACAAACCTTAAGCCGTACCATTATGACCTCAGCTACCACCTTGATAGTGGTATTCATGTTGTATCTGTTTGGGGGTGC CATGTTACACGGATTTTCTCTGACTATGCTGATAGGCATCTCTATTGGAACTCTTTCTTCTATTTATGTCGCCTCCGCCT TAGCTCTAAAACTGGGCATGAAACGAGAACATATGATCCAGCAAAAAGTAAAAAAAGAAGGCGAGGATCAGCCTTCTTTG TTACCTTGA Protein sequence : MSQNYTVEQLNYGRKVYNFMRWDNVAFGISFVLMAAAVLIISIRGFNWGLDFTGGTVIEITMEQPAPLDQIRDALKIAGL VGPVVQNFGTTRDLMIRMSAKHNNAIQELGQKIITIIDQSTNQKTILKRVEFVGPSVGSELAQTGSMALLVALLSILIYV GLRFEWRLALGTVLALGHDVIITLGILSLFKIEIDLTILASLMSVIGYSLNDSIVVSDRIRENFRQIRRGTSYEIINVSL TQTLSRTIMTSATTLIVVFMLYLFGGAMLHGFSLTMLIGISIGTLSSIYVASALALKLGMKREHMIQQKVKKEGEDQPSL LP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secF | AAT96102.1 | SecF | Not tested | T-PAI | Protein | 1e-55 | 46 |
| secF | AAT96066.1 | SecF | Not tested | T-PAI | Protein | 5e-56 | 46 |
