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Name : cspC (HDEF_0826) Accession : YP_002923695.1 Strain : Candidatus Hamiltonella defensa T5A Genome accession: NC_012751 Putative virulence/resistance : Unknown Product : cold shock protein, transcription antiterminator, affects expression of rpoS and uspA Function : - COG functional category : K : Transcription COG ID : COG1278 EC number : - Position : 819969 - 820178 bp Length : 210 bp Strand : + Note : COG1278 DNA sequence : ATGGCAAAAATTAAAGGTAAAGTTAAGTGGTTCAACGAATCTAAAGGTTTCGGCTTTATTACTCCAGACGATAATAGTAA GGACGTATTTGTTCACTTTTCTGCAATTCAAGATAGCGGTTTTAAAACTTTAGCCGAAGGTCAAGGTGTCGAATTTGAAA TTGCGGATGGTCAAAAAGGGCCATCCGCAGTGGATGTTAATAAAATTTAG Protein sequence : MAKIKGKVKWFNESKGFGFITPDDNSKDVFVHFSAIQDSGFKTLAEGQGVEFEIADGQKGPSAVDVNKI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAO18076.1 | unknown | Not tested | TTSS locus | Protein | 2e-17 | 69 |
| cspH | YP_216241.1 | cold shock protein-like protein | Not tested | SPI-11 | Protein | 3e-05 | 41 |
