Gene Information

Name : cspF (BWG_1377)
Accession : YP_002926574.1
Strain : Escherichia coli K-12
Genome accession: NC_012759
Putative virulence/resistance : Unknown
Product : Qin prophage; cold shock protein
Function : -
COG functional category : K : Transcription
COG ID : COG1278
EC number : -
Position : 1531938 - 1532150 bp
Length : 213 bp
Strand : +
Note : MG1655 equivalent: b1558

DNA sequence :
TTGTCCCGTAAAATGACAGGAATTGTCAAAACCTTTGACGGCAAAAGCGGCAAGGGTCTTATCACCCCATCCGATGGTCG
TATCGATGTCCAGCTTCATGTTTCAGCGCTCAATCTCCGCGATGCAGAAGAAATTACCACCGGATTACGCGTGGAATTTT
GCCGGATAAATGGTCTGCGTGGCCCTTCAGCTGCCAATGTTTACCTTTCATGA

Protein sequence :
MSRKMTGIVKTFDGKSGKGLITPSDGRIDVQLHVSALNLRDAEEITTGLRVEFCRINGLRGPSAANVYLS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cspH YP_216241.1 cold shock protein-like protein Not tested SPI-11 Protein 8e-21 75
unnamed AAO18076.1 unknown Not tested TTSS locus Protein 8e-06 45