Gene Information

Name : NT01EI_2150 (NT01EI_2150)
Accession : YP_002933561.1
Strain : Edwardsiella ictaluri 93-146
Genome accession: NC_012779
Putative virulence/resistance : Virulence
Product : type I secretion system ATPase family protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG2274
EC number : 3.6.3.43
Position : 2080072 - 2082207 bp
Length : 2136 bp
Strand : -
Note : -

DNA sequence :
ATGGTTGCCCTATGTACAGTGTCACAGTTTTATAATATTGCCTCCGATCCGGTATTTCTGATAAGGGAACTGGGGCTGGA
AGCGCAGGGGACCGTGCCCGGTGATATTGTCCAGGCGGCCGTGATAATAAAAATGAAAGCCCGGGTGATCACGGGGGTGA
CGCTCGAAAGGATCAGGAAAATCCCGCTGCCATCATTAATTCAGCTTAAAAATGGATGTTGGTATATTCTTACCGACAGA
AATGAAAATGGGGTTTTCAGACTTTTTGATCCGGTCCGGCGTAAGGTCTTTGACGAGCATGAAGATTCCGTGATGGCCCA
GTTGGGGGAACATGTGGTGCTGGTTCAGCGGCACATGATGGGAGCAGGCCGCGATCCCCGCGGGTTTTCCATCCGCTGGT
TTTTGCCGACCATTAAGCGCTATAAAAATCCGCTGACGCACGTTATTGTTGCCTCCTTCTTTATTCAAATGTTTGCCCTG
ATCGGTCCACTTTTTTTCCAGATTATCATCGATAAGGTTTTGGTGCATAAAAGTTATGAAACGCTGGTTGTCATCGCAAT
TGGGATGTTGGTCGTGGGGGTGTTTGATGTCATATTGCGCTATTTGCGGACATATGTATTAGCCCATACGGCTAATAGGA
TTGACGTGGAGTTGGGGCGTCGACTTTTTCATCACCTGTTTTCCCTGCCGATGAGCTATCTGGAGTCACGCAGTGCCGGG
AGCACCGTTGCGCGTATCCGTGAGCTGGAAAATATCCGTAATTTTTTTACCGGACAGGCACTCTTTTCTGTTATCGATTT
ATTTTTTATCTTTATTTTTATTGGCGTTTTGTTCTTTTATTCCTGGACGCTGGCGATGATTACCGTGGTCAGTATTCCGG
TGTATGTCCTCATCTCTGCGCTTTTGCGCCCGGCGATTAAAAAACGGATTGACAATAAGTTCTATGCCAATGCGGCAAGT
CAGAAGTTTCTGGTCGAGGCTGTGGTCGGGGCTCAGACAATCAAGGCCTCTGCGGTGGAACCGATGTTCCGCAAACAGTG
GGAGGAGCGCCTGGCACACTACGTTCACACCTCTTTTGAGGCCTCCCAGCTTACCTCCATCGGGCAGAATTCAATCCTGC
TTATCAATAAGATATTTTCAATATTTATTTTGGCATTTGGGGCCGCCGCCGTCATCGGTGGAGAGTTAACGGTAGGGGAG
TTGATCGCATTCAATATGATCTCCGGGCAGGTTGTGCAGCCGATTCTGAGAATATCGCAACTCTGGCAGGATTTTCAGCA
GACGCAGGTTTCTGTTGAGCGGTTGGGCGATATTATTAATAACCAACCGGAGTTTATTCAAATGCAACAGGGTAAACTGC
CTCCCTTACAGGGTCATATCCGGATGGAGAATGTCTGCTTTTCCTACCGGAAGAGTGATCATTATGTCATTCGGGATATC
GATCTGGACATCAAGGCCGGAGAGGTGATTGGTATTGTCGGTGCATCCGGTTCGGGGAAATCAACGCTGACCAAGCTGAT
CCAGCGACTATATATGCCGGTGGAGGGGAAGATATTCATTGATGGGATTGAAATGAATAATGTTGATCCTTCCTGGCTGC
GCCGCAATATTGGGGTGGTGCTGCAGGAGAATGTTCTGTTTAACCGCACAATCCATGAAAATATTGCCTTTGCCAATCCG
GGAATGTCTCGGGTGGATGTTATCCGGGTCGCAAAACTGGCCGGCGCCGATGAGTTTATCTCTGCGCTGCCCCAGGGCTA
TGATTCGATCATTGAGGAGCGGGGCGGAAATCTTTCGGGGGGGCAGCGCCAGCGTGTTGCGATTGCCCGGTCTCTGGCCA
CCAATCCATCCGTGCTTATTTTTGATGAGGCAACCAGCGCCCTTGATTATGAAAGTGAAAATATTATCAGAGAAAACATG
AAATATATTGTGGAGGGGCGCACGGTGATTATTATTGCACACCGCTTATCGACGGTGCGCCAATGTGACAGGATTATCAG
CATGGCACGGGGAAGAATTGTTGAACAGGGGGGGCATGCAGAATTAATGACCGCTAAAGGTGTTTATTTCCATTTGTGGT
CATTGCAAAACAGTCAGAGTGGCGTTGATGATGCGTCCATTGTCGGGGAAGCATAA

Protein sequence :
MVALCTVSQFYNIASDPVFLIRELGLEAQGTVPGDIVQAAVIIKMKARVITGVTLERIRKIPLPSLIQLKNGCWYILTDR
NENGVFRLFDPVRRKVFDEHEDSVMAQLGEHVVLVQRHMMGAGRDPRGFSIRWFLPTIKRYKNPLTHVIVASFFIQMFAL
IGPLFFQIIIDKVLVHKSYETLVVIAIGMLVVGVFDVILRYLRTYVLAHTANRIDVELGRRLFHHLFSLPMSYLESRSAG
STVARIRELENIRNFFTGQALFSVIDLFFIFIFIGVLFFYSWTLAMITVVSIPVYVLISALLRPAIKKRIDNKFYANAAS
QKFLVEAVVGAQTIKASAVEPMFRKQWEERLAHYVHTSFEASQLTSIGQNSILLINKIFSIFILAFGAAAVIGGELTVGE
LIAFNMISGQVVQPILRISQLWQDFQQTQVSVERLGDIINNQPEFIQMQQGKLPPLQGHIRMENVCFSYRKSDHYVIRDI
DLDIKAGEVIGIVGASGSGKSTLTKLIQRLYMPVEGKIFIDGIEMNNVDPSWLRRNIGVVLQENVLFNRTIHENIAFANP
GMSRVDVIRVAKLAGADEFISALPQGYDSIIEERGGNLSGGQRQRVAIARSLATNPSVLIFDEATSALDYESENIIRENM
KYIVEGRTVIIIAHRLSTVRQCDRIISMARGRIVEQGGHAELMTAKGVYFHLWSLQNSQSGVDDASIVGEA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hlyB NP_755448.1 hemolysin B Virulence PAI I CFT073 Protein 3e-149 49
hlyB CAD33760.1 hemolysin B Virulence PAI I 536 Protein 4e-149 49
hlyB CAD42038.1 HlyB protein Virulence PAI II 536 Protein 4e-149 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
NT01EI_2150 YP_002933561.1 type I secretion system ATPase family protein VFG1501 Protein 2e-149 49
NT01EI_2150 YP_002933561.1 type I secretion system ATPase family protein VFG0907 Protein 1e-149 49
NT01EI_2150 YP_002933561.1 type I secretion system ATPase family protein VFG1557 Protein 2e-149 49
NT01EI_2150 YP_002933561.1 type I secretion system ATPase family protein VFG0841 Protein 2e-136 47
NT01EI_2150 YP_002933561.1 type I secretion system ATPase family protein VFG1269 Protein 7e-137 43