Gene Information

Name : NT01EI_2744 (NT01EI_2744)
Accession : YP_002934147.1
Strain : Edwardsiella ictaluri 93-146
Genome accession: NC_012779
Putative virulence/resistance : Virulence
Product : type VI secretion ATPase, ClpV1 family, putative
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 2639112 - 2641733 bp
Length : 2622 bp
Strand : +
Note : -

DNA sequence :
GTGAATACAGATTTGAAAGCCTTGACGGGGAAAATGAACCAGACCTGCCATCAAGCACTGGAGGCTGCAGCAGGCCTGTG
TCTGTCACGAGGCCATCACGAGGTCGAGATCGAACACGTGCTGCTCAAGTTGCTGGAGACGGGCAACACGGATCTGGATC
ACCTGCTGCAGCACTATGGGATCGACGCCGGCCGTTTTCAGCGGGACGTGGAGCAGGCGCTGGATCGCCTGAAGGACGGA
TGCAGCCGACAGCCGGTACTCTCCCCCCATCTGCCACGACTGTTGTCTGATGCCTGGCTGGTGGCCTCCGTCAACTGTGG
CGAGAGCCAGATCCGCAGCGGTCATCTGGTCATGGCCCTACTGGGTGACACGGTGCTGCTGCAGCTCGCCAGGGCGCTGT
CGCCAGAGTGGGCTGCGTGGTCTGCGGCAGATCTGCTGCACAAGTGGCCCGCGCTGGTCGTCGGCAGCCGGGAGGCGACG
GCGCGGCACGCGCCGGGAGTTCATGCGGGCGCCTCCCCCTCACCCGCTCTGGATCAATACACGGTAAACCTGACCGAGCG
GGCCCACCAGCATCAGCTGGACCCGGTTCTCGGGCGGGATGGCGAGATTCGGCAGATGATCGATATTTTGCTGCGCCGCA
GGCAGAACAACCCAATTCTTACCGGTGAGGCCGGCGTAGGGAAAACCGCCGTAGTGGAAGGGCTGGCCCTGCGCATTGCG
GACGGAGAGGTTCCGGATAGCCTGCGCAATGTTGCCCTACGGATGCTGGATCTGGGCCTGCTCCAGGCGGGTGCCAGTGT
CAAAGGGGAGTTTGAACGTCGTCTCAAAGCGGTCATCGACGAGGTGAAGGCCTGCAGTGAACCGGTCATTTTGTTCATCG
ATGAAGCCCATACGCTGATCGGGGCAGGAGGTGCAGCAGGTCAGAATGATGCCGCCAATCTGCTGAAGCCGGTACTGGCC
CGGGGAGAGCTGCGCACCATTGCCGCCACCACCTGGAGTGAATACAAAAAGTATTTCGAGAAAGATCCTGCTCTGGCGCG
GCGCTTCCAGGCCATCAAAGTGGAGGAGCCCAGCGAGGAGATCGCCATGGTGATGCTGCGTGGCATGCTGAGTAAAATGC
GCCAGCACCACCAGGTACGGATTCTGGATGAGGCGGTAACGGCCGCCGTCAGGCTGTCACACCGTTATTTGACCGGCAGA
CAGCTGCCGGATAAAGCGGTCAGCGTACTGGATACCGCCTGCGCCCGGATTGCGCTCGGGCAGCGTACCCTGCCAGCCCC
CGTCGAGGATGCATGCCGCCATCTGGCGCACCTCCAGACCGAAATTGCGCTGCTGGAGCAGGAGCAGGCCGGTGGCCTCG
ACCATGGTAGCCGGCTAATGACACTACAGGAGCAGGCCCGGGTCGCCCAAGACCATTATCAGACTCTGGAGCAGCGCTGG
ATCGAGGAGTGTGAGCAGGTCGCCATCATCCAGGCGCTGCAGGTGCAGTTGGAGCAGGAGGATTGTCCGGACCGCAGTGA
GATGCTGGCCCGACGGGAGCAGGCCGTTCTGGCGCTCGAGCAGATGCAGGGCCGGGAGCCGCTGGTGCAGACCTGTGTGG
ATGAGTCCGCCATTGCGGCGGTGATCTCGGCATGGACGGGGATCCCGCTGGGTAAAATGGTGCAGGATGAGCTGGAGATG
GTCCGCCAGCTACAGACACGGCTGGCAGAACGGGTCATCGGACAGCCCTATGCCCTGGATACCATCGCCCGGGGTATTCG
CCTGTCCCGTGCGGGACTGGAGGATCCGGACAAGCCCATCGGCGTCTTTCTGCTGGTCGGCTCCAGCGGCGTGGGAAAAA
CCGAGACCGCGCTGGCGCTGGCCGAAACCCTGTATGGCGGTGAGCGTAACCTGATCACCATCAACCTGTCGGAGTTTCAG
GAGGCCCATACCGTTTCGACGCTGCGGGGCTCACCGCCGGGCTATGTCGGCTATGGTGAAGGCGGTGTGCTGACAGAGGC
AGTACGCCGTAAGCCCTACAGCGTGGTCTTGCTGGATGAAGTAGAGAAAGCCCACCCGGATGTACTGGAGGTATTTTTTC
AGGTGTTTGACAAAGGGGTCATGGATGATGCCGAGGGGCGGGAGATCAACTTCCGCAATACCGTTATCCTGCTGACCTCC
AACGTCGGCAGCGATACCCTGATGGCCTACTGTCAGGACGGTATGGCACAGCCCGAACCGGAGCAGCTGTGTGAGGTGCT
GCGGGATGACCTGACCCAGGCCTTCAAGCCTGCCTTTCTCGGACGCCTGCAGGTGGTACCCTACTACCCGGTACGGGGTA
CGGTGCTGAAACAGATTATCCACCTCAAGCTGGATAAGATTGCCCGACGCTTTCAGCGCAATCATCAGGCCACTCTCCAT
TACGATGAGTCCCTGGTGGATGGCATTGCCAAACGCTGTACCCAGCCGGACAGCGGCGCCCGCCTGATCGATAATATTCT
GTCGGCCCAGCTGTTATCCGGTATGGCGGACGCGGTGCTGGCACAGATGGCCGCCGGCGAGCCGGTATCCGATATCACCA
TCGCGATGGATGAGCACGGCCGACTGACAGGATCGCTAGAGGGGAGTGAAGGATGGAATTAA

Protein sequence :
MNTDLKALTGKMNQTCHQALEAAAGLCLSRGHHEVEIEHVLLKLLETGNTDLDHLLQHYGIDAGRFQRDVEQALDRLKDG
CSRQPVLSPHLPRLLSDAWLVASVNCGESQIRSGHLVMALLGDTVLLQLARALSPEWAAWSAADLLHKWPALVVGSREAT
ARHAPGVHAGASPSPALDQYTVNLTERAHQHQLDPVLGRDGEIRQMIDILLRRRQNNPILTGEAGVGKTAVVEGLALRIA
DGEVPDSLRNVALRMLDLGLLQAGASVKGEFERRLKAVIDEVKACSEPVILFIDEAHTLIGAGGAAGQNDAANLLKPVLA
RGELRTIAATTWSEYKKYFEKDPALARRFQAIKVEEPSEEIAMVMLRGMLSKMRQHHQVRILDEAVTAAVRLSHRYLTGR
QLPDKAVSVLDTACARIALGQRTLPAPVEDACRHLAHLQTEIALLEQEQAGGLDHGSRLMTLQEQARVAQDHYQTLEQRW
IEECEQVAIIQALQVQLEQEDCPDRSEMLARREQAVLALEQMQGREPLVQTCVDESAIAAVISAWTGIPLGKMVQDELEM
VRQLQTRLAERVIGQPYALDTIARGIRLSRAGLEDPDKPIGVFLLVGSSGVGKTETALALAETLYGGERNLITINLSEFQ
EAHTVSTLRGSPPGYVGYGEGGVLTEAVRRKPYSVVLLDEVEKAHPDVLEVFFQVFDKGVMDDAEGREINFRNTVILLTS
NVGSDTLMAYCQDGMAQPEPEQLCEVLRDDLTQAFKPAFLGRLQVVPYYPVRGTVLKQIIHLKLDKIARRFQRNHQATLH
YDESLVDGIAKRCTQPDSGARLIDNILSAQLLSGMADAVLAQMAAGEPVSDITIAMDEHGRLTGSLEGSEGWN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 4e-153 48
aec27 YP_851418.1 ATPase Not tested PAI II APEC-O1 Protein 2e-129 42
aec27 AAQ96721.1 Aec27 Not tested AGI-1 Protein 1e-129 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
NT01EI_2744 YP_002934147.1 type VI secretion ATPase, ClpV1 family, putative VFG2076 Protein 0.0 51
NT01EI_2744 YP_002934147.1 type VI secretion ATPase, ClpV1 family, putative VFG2084 Protein 1e-149 46