Gene Information

Name : EUBREC_3556 (EUBREC_3556)
Accession : YP_002939416.1
Strain : Eubacterium rectale ATCC 33656
Genome accession: NC_012781
Putative virulence/resistance : Resistance
Product : lipoprotein ABC transporter ATPase
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 3318319 - 3319032 bp
Length : 714 bp
Strand : -
Note : CytoplasmicMembrane, score:10.00; COG1136 ABC-type antimicrobial peptide transport system, ATPase component; KEGG:0ABC-type transport system, involved in lipoprotein release, ATPase component; HMMPfam:IPR003439; BlastProDom:IPR003439; HMMSmart:IPR003593;

DNA sequence : 
ATGAAAGGAATTTCCGAAAAGACTTTAATCAAAATAAAGGATTTGAAAGCAAGCGTCAAATTGAATAATGGCGATATGCT
GACAACAGTAACCAACGCTAATATGGAATTGCAACGAGGGCGCAGTTATGCCATTGTCGGAAAGTCCGGCTCAGGCAAAA
CAAGCCTTATATCCATTATTGGCTTGTTAAATCGGGAATATGAGGGCGAGTACCTTTATGATGGTATATCTATTTCTGCT
TTGAAAGACCGTGATCTGTCTATACTGCGAGCCAATAATATCGGATTTGTATTTCAGAACTACTCTCTGATTAAGCACTT
GCGGGTATGGGAAAATATCGAATTACCCCTACTCTATGCCAAAAAGTCGTTTACCGCCAAACAGCGTCACGAGATAATTA
CAGGCTTGCTAAAAAGTGTCGGCTTAGAAAGCAAGGAAAATGATTACCCAATCAATTTGTCCGGCGGTGAACAACAAAGA
GTTGCAATCGCAAGGGCGCTTGCAGTATCTCCGGAAGCCATTTTATGTGATGAGCCTACGGGAGCGTTGGATAAAAAGAC
GGGAACGCAGATTATGGAACTGTTGCACAGCGTCGTAAAAGAAAATGGAATTATGCTGCTGTTGGTTACGCACGATCCTG
ATATTGCAGATACCTGTGATACGATTTTTGAAATGGATGGAGGGAGGATAACTTGTGCTAAAAATGATACTTAA

Protein sequence : 
MKGISEKTLIKIKDLKASVKLNNGDMLTTVTNANMELQRGRSYAIVGKSGSGKTSLISIIGLLNREYEGEYLYDGISISA
LKDRDLSILRANNIGFVFQNYSLIKHLRVWENIELPLLYAKKSFTAKQRHEIITGLLKSVGLESKENDYPINLSGGEQQR
VAIARALAVSPEAILCDEPTGALDKKTGTQIMELLHSVVKENGIMLLLVTHDPDIADTCDTIFEMDGGRITCAKNDT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-26 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
EUBREC_3556 YP_002939416.1 lipoprotein ABC transporter ATPase NC_012469.1.7686878. Protein 5e-37 44