Gene Information

Name : Vapar_0193 (Vapar_0193)
Accession : YP_002942122.1
Strain :
Genome accession: NC_012791
Putative virulence/resistance : Virulence
Product : type VI secretion protein
Function : -
COG functional category : S : Function unknown
COG ID : COG3516
EC number : -
Position : 200601 - 201170 bp
Length : 570 bp
Strand : +
Note : TIGRFAM: type VI secretion protein, VC_A0107 family; PFAM: conserved hypothetical protein; KEGG: bpt:Bpet4117 hypothetical protein

DNA sequence :

ATGGCAGACAACCGTGTCAGAAACAGTGGTCAGAAGTTCATCGCGCGCAACCGGGCACCCCGCGTGCAGATCGAGTACGA
CGTCGAGATCTACGGCAGCGAGCGCAAGATCCAGCTGCCCTTCGTGATGGGCGTGATCGCCGATCTCGCGGGCAAGCAGG
TCGACCCGATGCCCGACCTTGCCGAGCGCGACTTCATGGCGGTGGACATCGACAACTTCGACGACCGCATGAAGGCCATC
AAGCCGCGCGTGGCCTTCCAGGTGCCCAACACCCTCACGGGCGAAGGGCAGATGAACGTCGACATCACCTTCGACAGCAT
GGATGACTTCTCGCCCGCGCGCATCGCCCGCCAGGTCGGCGCGCTGCAGCATCTGCTGGAAGCGCGCACCGAGCTTTCCA
ACCTGCTGTCCTACATGGACGGCAAGAACGGCGCCGAGCAGCTGATCGCCCAGGCGCTGCAGAACCCGGAGCTGCTCAAG
TCGCTCGCATCCGCACCCAATCCCGCCGTTGCCAAGGCGATCGAGGCCGCGAACGAAAAGTCGGGCAACCCCGGCACCCC
TTCCGAGTAA

Protein sequence :

MADNRVRNSGQKFIARNRAPRVQIEYDVEIYGSERKIQLPFVMGVIADLAGKQVDPMPDLAERDFMAVDIDNFDDRMKAI
KPRVAFQVPNTLTGEGQMNVDITFDSMDDFSPARIARQVGALQHLLEARTELSNLLSYMDGKNGAEQLIAQALQNPELLK
SLASAPNPAVAKAIEAANEKSGNPGTPSE

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
STY0297	NP_454879.1	conserved hypothetical protein	Not tested	SPI-6	Protein	4e-58	66

• Homologs from VFDB (virulence genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
Vapar_0193	YP_002942122.1	type VI secretion protein	VFG2069	Protein	2e-57	68