Gene Information

Name : Vapar_0199 (Vapar_0199)
Accession : YP_002942128.1
Strain :
Genome accession: NC_012791
Putative virulence/resistance : Virulence
Product : type VI secretion protein
Function : -
COG functional category : S : Function unknown
COG ID : COG3520
EC number : -
Position : 206635 - 207801 bp
Length : 1167 bp
Strand : +
Note : TIGRFAM: type VI secretion protein, VC_A0111 family; PFAM: protein of unknown function DUF1305; KEGG: bpt:Bpet4110 hypothetical protein

DNA sequence : 
ATGAGCATGCGCACCACGGCCGAGCTCGCCGACGATTCGCAGCAGGCGCCGCCGGCTGCGATCGAGCATGCCGCGCCCGA
GCATGCCGCGGCACCCGCGCGGCGCGGTGCGGCCGAAGCCGATCCGGTCCTGTGGGCCGGCCTGGTCGACCAGCCTTTCG
AGCACGACCTGTTCATGCTGCTGCGCCGCCTCGATGCGCACGGCAGCCATCCGCTGCTGGGCCGCGCGCCGCGCCCGCTC
GACGAGCCTTTGCGGCTGGGCCAGGAGCCGTCGATGGCCTTTGCGCCCTCGAACGTCTCGGGCGTCGATGTCGACGGCGA
CGGCCCGCCGCGCATCTCGATCTACGGCTTCGGCCTGTTCGGCCCCAACGGGCCGCTGCCGCTGCACCTGACCGAGTACG
CGCGCGAACGCAAGCGCCACCACAGCGACAACACGCTCAGCGCCTTCGCCGACCTGTTCCACCACCGGCTCATCCTGCTG
TTCTACCGGGCCTGGGCCGATGCCCAGTCGGTCAACAGCCTGGACCGCCCCGACGGCCACCGCTTCGTCGACTACGTGGC
CAGCCTCATGAACATGGGGCAGCCGGGCCTCAAGGCGCGCGACCGCATCGCCGACCATGCGCGCACCTTCATGGCCGGGC
ACCTCGTGCGCCAGACGCGCAACCCCGAGGGGCTGATCCAGATCCTGCGGCTGTATTTCGACGTGCCTGTGCGCGTCGAG
GAGTTCGTGAGCGACTGGGTGATGCTCGACGAGCGCGAGATCAGCCGCATCGGCACTTCCGGGCGCAACCAGAAGCTGGG
CGCCGGCGCCACCGTCGGGCTGGCGGTGCGCGATGCGCAGGGCAAGTTCAGGCTCGAACTCGGGCCGCTCTCGCAGCGCG
AGTTCCGCGACTTCCTGCCGGGCAGCAAGCGCCTGCAGCAGGTGGTCGACTGGGTGCGCCAGTACGTGGGCATCGAGTTC
GCGTGGGAGCTGCGCCTCGTGCTCAAGAAGCAGGAAGCCCTCGGCATGCAGCTGGGCAGCGACCAGCGCCTGGGCTGGGG
CAGCTGGCTCGGCACGCGCCTCTCGCCCACCGACGCCGGCGACATGCTGTTCCAGCCCGAAGCCCTGTATTCCCGTTCCG
CATCGGCTGCTTCCGCGGCGGCCGAAGCCTCTTCCATGGCCTTATGA

Protein sequence : 
MSMRTTAELADDSQQAPPAAIEHAAPEHAAAPARRGAAEADPVLWAGLVDQPFEHDLFMLLRRLDAHGSHPLLGRAPRPL
DEPLRLGQEPSMAFAPSNVSGVDVDGDGPPRISIYGFGLFGPNGPLPLHLTEYARERKRHHSDNTLSAFADLFHHRLILL
FYRAWADAQSVNSLDRPDGHRFVDYVASLMNMGQPGLKARDRIADHARTFMAGHLVRQTRNPEGLIQILRLYFDVPVRVE
EFVSDWVMLDEREISRIGTSGRNQKLGAGATVGLAVRDAQGKFRLELGPLSQREFRDFLPGSKRLQQVVDWVRQYVGIEF
AWELRLVLKKQEALGMQLGSDQRLGWGSWLGTRLSPTDAGDMLFQPEALYSRSASAASAAAEASSMAL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0288 NP_454870.1 hypothetical protein Not tested SPI-6 Protein 4e-47 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Vapar_0199 YP_002942128.1 type VI secretion protein VFG2075 Protein 3e-52 46