Gene Information

Name : Vapar_2142 (Vapar_2142)
Accession : YP_002944043.1
Strain :
Genome accession: NC_012791
Putative virulence/resistance : Unknown
Product : cysteine desulfurase IscS
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG1104
EC number : 2.8.1.7
Position : 2288167 - 2289387 bp
Length : 1221 bp
Strand : +
Note : KEGG: dia:Dtpsy_1638 cysteine desulfurase IscS; TIGRFAM: cysteine desulfurase IscS; PFAM: aminotransferase class V; aromatic amino acid beta-eliminating lyase/threonine aldolase

DNA sequence :
ATGGACGTCACTCCTCATTTCCCGATCTATCTCGATTACGGCGCCACCACGCCGGTTGACCCGCGCGTGGTCGACGCCAT
GATCCCCTGGTTGCGCGAGCACTTCGGCAACCCGGCGTCGCGCAGCCACGCCTGGGGCTGGGAGGCTGAAGAGGCGGTCG
AGAAGGCGCGCGGCTACGTGGCCGAACTGATCGGAGCCGACCCGCGCGAGATCGTCTGGACCTCCGGCGCCACCGAGTCG
AACAACCTCGCGCTCAAGGGCGCGGCCCATTTCTACAAGGGCAAGGGCAAGCACCTCATCACGGTGAAGACCGAGCACAA
GGCCGTGCTCGACACCATGCGCGAACTCGAGCGCCAGGGCTTCGAAGTCACCTACATGGACGTCGAGGAAAACGGCCTGC
TCGACCTGGACAAGTTCAAGGCGGCGATCCGCCCCGACACCATCCTTGCGAGCGTGATGTACGTCAACAACGAGATCGGC
GTCATCCAGGACGTGGTCGCGCTCGGCAACGCCTGCCGCGAAAAAGGCGTGATCTTCCATGTCGACGCGGCCCAGGCCAC
CGGCAAGGTCGAGATCGACATCGCCAAGCTGCCCATCGACCTGATGAGCCTGGCTTCGCACAAGACCTACGGCCCCAAGG
GCATCGGCGCGCTGTACGTGCGCCGCAAGCCCCGCGTGCGGCTCGAGGCACAGATGCACGGCGGCGGCCACGAGCGCGGC
ATGCGTTCGGGCACGCTGCCCACGCACCAGATCGTGGGCATGGGCGAGGCCTTCCGCATCGCCAAGCTCGAAATGAAGGA
AGACATCGCCAAGGCGGCGCGCCTGCAGAAGCGCCTGCTCGACGGCCTGAAGGACGTGGACCAGGTGTTCATCAACGGCG
ACCTCGAGCAGCGTGTGCCGCACAACCTGAACATGAGCTTCAACTACGTGGAAGGCGAGTCGCTGATCATGGGCATCAAG
GGCTTGGCGGTGTCGTCGGGTTCGGCCTGCACCTCGGCCAGCCTCGAACCCAGCTACGTGCTGCGCGCCCTGGGCCGCAG
CGACGAGCTGGCCCACAGCAGCCTGCGCATGACCATCGGCCGTTTCACGACCGAGGAAGAAATCGACTACGCCATCTCGA
CCATCAAGCACAACGTCGCCAAGCTGCGCGAGCTGAGCCCCCTGTGGGAGATGTTCCAGGACGGCGTCGACATCAGCACG
ATCCAGTGGTCGGCCCACTGA

Protein sequence :
MDVTPHFPIYLDYGATTPVDPRVVDAMIPWLREHFGNPASRSHAWGWEAEEAVEKARGYVAELIGADPREIVWTSGATES
NNLALKGAAHFYKGKGKHLITVKTEHKAVLDTMRELERQGFEVTYMDVEENGLLDLDKFKAAIRPDTILASVMYVNNEIG
VIQDVVALGNACREKGVIFHVDAAQATGKVEIDIAKLPIDLMSLASHKTYGPKGIGALYVRRKPRVRLEAQMHGGGHERG
MRSGTLPTHQIVGMGEAFRIAKLEMKEDIAKAARLQKRLLDGLKDVDQVFINGDLEQRVPHNLNMSFNYVEGESLIMGIK
GLAVSSGSACTSASLEPSYVLRALGRSDELAHSSLRMTIGRFTTEEEIDYAISTIKHNVAKLRELSPLWEMFQDGVDIST
IQWSAH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAT96060.1 cysteine desulfurase Not tested T-PAI Protein 5e-137 70