Gene Information

Name : Vapar_3311 (Vapar_3311)
Accession : YP_002945195.1
Strain :
Genome accession: NC_012791
Putative virulence/resistance : Unknown
Product : transketolase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG3959
EC number : -
Position : 3490036 - 3490875 bp
Length : 840 bp
Strand : +
Note : PFAM: transketolase; KEGG: lch:Lcho_4274 transketolase domain-containing protein

DNA sequence :
GTGTCTGACTTATCAACGCTTCAACAAAGCGCCCGCCGCATTCGCGCCTACGCACTGCGCATGGGCGAAGTGCAAGGACA
GGGCTATATCGGCCAGGCGCTCGGGTGGGCCGACGTCCTTGCGGTGGCCTACAAGCACGCGCTGGCGTACAGGCCGGAGG
AGCCGAAGTGGGAAGGCCGCGACCGCTTCCTCCTGTCCCACGGCCACTATGCGATTGCCTTCTACGCGGCACTGATCGAG
GCCGGGATCATTCCCGAGGAAGAGCTCGAAACCTACGGCAGCGACGACAGCCGGCTGCCGATGTCCGGCATGGCCACCTA
CACGCCGGGCATGGAAATGTCCGGCGGCTCGCTCGGGCAAGGCCTTCCGATTGCCGTCGGCATGGCGCTGGGGCTGCGTC
TGAAGAACAACCCGGCCTTCGTCTACAACTCGATGTCGGACGGAGAACTGGACGAGGGATCGACCTGGGAGGCTGCGATG
GGCGCCGCGCACCACCGCCTGCCCAACCTGATCTGCCTGGTCGATATCAACAACCAGCAGGCCGATGGCCCGTCCGGAAA
GATCATGGGCTTCGAGCCGCTCGCCGCCAAATGGGAAGCGTTCGGCTGGCACGTGCAGCGCGTCGATGGCAACGACCTGC
CGGCCGTCATGGCTGCCTTCGATGCCGCGCGCGCACTGAAGGAAGAAAAGCCGCGCGTCATCTTGTTCGACACATTGATG
GGACGGGGCGTCCCCTTCCTCGAGACGCGGGACAAGAACCATTTCATCCGCGTCGACCCGCCGGAATGGCAGCAAGCCAT
CGCCCATGTCGACAGCGCGCAATCCGAAGGAGCCCTGTGA

Protein sequence :
MSDLSTLQQSARRIRAYALRMGEVQGQGYIGQALGWADVLAVAYKHALAYRPEEPKWEGRDRFLLSHGHYAIAFYAALIE
AGIIPEEELETYGSDDSRLPMSGMATYTPGMEMSGGSLGQGLPIAVGMALGLRLKNNPAFVYNSMSDGELDEGSTWEAAM
GAAHHRLPNLICLVDINNQQADGPSGKIMGFEPLAAKWEAFGWHVQRVDGNDLPAVMAAFDAARALKEEKPRVILFDTLM
GRGVPFLETRDKNHFIRVDPPEWQQAIAHVDSAQSEGAL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAT96177.1 transketolase Not tested T-PAI Protein 5e-87 68
unnamed AAT96100.1 transketolase Not tested T-PAI Protein 4e-86 67
unnamed AAT96229.1 transketolase Not tested T-PAI Protein 2e-86 67
unnamed AAT96056.1 transketolase Not tested T-PAI Protein 2e-86 67
unnamed AAT96117.1 transketolase Not tested T-PAI Protein 9e-87 67