Gene Information

Name : Vapar_3312 (Vapar_3312)
Accession : YP_002945196.1
Strain :
Genome accession: NC_012791
Putative virulence/resistance : Unknown
Product : transketolase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG3958
EC number : -
Position : 3490875 - 3491873 bp
Length : 999 bp
Strand : +
Note : PFAM: transketolase; transketolase domain protein; KEGG: lch:Lcho_4275 transketolase

DNA sequence :
ATGAGTACCACCACCGAAAAGAAGCCGAGGCTCACGACCTCCGCGATGATCGCCTCCATCGCCAGCGAAGGCCAGCGCGT
GACAGCGGCGCCGTTCGGCAAAGCCCTGGTCGAGTTGGGCCGCAGCCGTCCGGAGATCGTCGGGATGACGGCCGACCTTG
CCAAGTACACCGACCTGCACCTGTTCGCGAAGGAGTATCCCGAGCGGTTCTTCCAGATGGGCATGGCCGAGCAGTTGCTG
ATGGCGGCCGCGGGTGGCATGGCCAAGGAAGGATTCATTCCCTTTGCGACGACGTACGCCGTCTTCGGCACCCGCCGGGC
CTACGACTTCGTGCATCAGGTGATTGCGGAAGAGAACCTCAACGTCAAGATGTGCTGCGCGCTGCCGGGGCTGACCACCG
GCTATGGACCGAGCCACCAGGCCACCGAAGACCTGGCATTGATGCGCGGCATCCCGGGCCTGACGATCATCGACCCTTGC
GACGCGCTCGATATCGAGCAGGCCGTACCCCAGATGGCCGACCATCAGGGCCCCGTCTATATGCGGTTGCCGCGCGGCAA
TGTGCCGCGCGTATTGGACGAGTACGACTACAAGTTCGAACTCGGCAAGGCCAAGCTGATTCGCGACGGAAAAAGCGTAC
TGGTGATCGCCAGCGGCTTCATGACGATGCGCTCGCTCGAGGTCGCCGAGCAACTCAGGAATGACGGCGTCGATATTGCC
GTGCTGCACGTGCCCACGATCAAGCCGCTGGATGAGGCAACGATCCTTGCCGAAGTCCGGCGGCTGGGCCGGCTGGTCGT
GGTGGCGGAGAACCATTCGGTGATCGGCGGCCTTGGCGAGGCGGTGGCGGGCCTCCTGATGCGCTCGGGAGTCTCGACGG
CCTATCGCCAGATCGGCTTGCCCGATGCGTTCCTCGACGCGGGCGCCCTGCCGACACTGCATGACCGCTACGGCATCTCG
GCGCAGATGATGAGCCGGCAGATCAAGGGCTGGGTATGA

Protein sequence :
MSTTTEKKPRLTTSAMIASIASEGQRVTAAPFGKALVELGRSRPEIVGMTADLAKYTDLHLFAKEYPERFFQMGMAEQLL
MAAAGGMAKEGFIPFATTYAVFGTRRAYDFVHQVIAEENLNVKMCCALPGLTTGYGPSHQATEDLALMRGIPGLTIIDPC
DALDIEQAVPQMADHQGPVYMRLPRGNVPRVLDEYDYKFELGKAKLIRDGKSVLVIASGFMTMRSLEVAEQLRNDGVDIA
VLHVPTIKPLDEATILAEVRRLGRLVVVAENHSVIGGLGEAVAGLLMRSGVSTAYRQIGLPDAFLDAGALPTLHDRYGIS
AQMMSRQIKGWV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAT96118.1 transketolase Not tested T-PAI Protein 8e-101 74
unnamed AAT96057.1 transketolase Not tested T-PAI Protein 2e-119 73
unnamed AAT96230.1 transketolase Not tested T-PAI Protein 6e-88 73
unnamed AAT96101.1 transketolase Not tested T-PAI Protein 5e-120 71