Gene Information

Name : Vapar_3944 (Vapar_3944)
Accession : YP_002945824.1
Strain :
Genome accession: NC_012791
Putative virulence/resistance : Virulence
Product : two component LuxR family transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG4566
EC number : -
Position : 4185745 - 4186359 bp
Length : 615 bp
Strand : +
Note : PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR; KEGG: rfr:Rfer_0921 two component LuxR family transcriptional regulator

DNA sequence : 
GTGACCGTCCTTGCCAACCACCTGTGCATCGTCGACGACGACGAGGCCGTACGCCGCTCGCTGGGCCTCCTGCTGCTGTC
GCGCGGCCATGCGGTGCAGGCCTTTGCCTCGGGCGAGGCCTTCCTGGCCGGCGCCGACCTGCAGCGTCCGGGCTGCGTCG
TGCTGGACCTGCGCATGGAGGGCATGAGCGGGCTGCAGGTGTTCGATGCGCTGCGCGCGCAGGACAGTCCGCTGGTGGTG
ATCTTCCTGTCCGGCCACGGCGACATCCCGATGGCCGTGGAGGCGGTGCAGAACGGCGCCTTCGGCTGGCTCGAGAAGCC
CTGCAACGACGAGCGCCTGCTCGAGAGCATTGCCAAGGCGCTGCAGAAGGCCGAAGAGATCGCCCTGCGCCGGCAGGCCC
GGCAGGCGGCCGAGGCCCTGTGGGCCAAGCTCACGCCGCGCGAGATGCAGGTGGCCCGGCTGGTCGCCCAGGGCCTGCCC
AACAAGCGCATTGCGCTGGAGCTCGCGCCGCTGGAGCAGCGCACGGTGGAAACGCACCGCGCCCACGTGTTCGCCAAGCT
CGGCCTGTCGAACAGCCACGAGCTCGACCGCTTCCTGCGCGAGCACGGCCTGTAA

Protein sequence : 
MTVLANHLCIVDDDEAVRRSLGLLLLSRGHAVQAFASGEAFLAGADLQRPGCVVLDLRMEGMSGLQVFDALRAQDSPLVV
IFLSGHGDIPMAVEAVQNGAFGWLEKPCNDERLLESIAKALQKAEEIALRRQARQAAEALWAKLTPREMQVARLVAQGLP
NKRIALELAPLEQRTVETHRAHVFAKLGLSNSHELDRFLREHGL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ttrR NP_805058.1 two-component response regulator Virulence SPI-2 Protein 2e-17 41
ttrR CAB37412.1 TtrR Virulence SPI-2 Protein 1e-17 41
ttrR YP_216395.1 tetrathionate reductase complex: response regulator Virulence SPI-2 Protein 2e-17 41
ttrR NP_456141.1 putative two-component response regulator Not tested SPI-2 Protein 2e-17 41
ttrR NP_460352.2 response regulator Virulence SPI-2 Protein 2e-17 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Vapar_3944 YP_002945824.1 two component LuxR family transcriptional regulator VFG0488 Protein 5e-18 41