Gene Information

Name : Vapar_5169 (Vapar_5169)
Accession : YP_002947037.1
Strain :
Genome accession: NC_012791
Putative virulence/resistance : Virulence
Product : TonB-dependent siderophore receptor
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG4772
EC number : -
Position : 5490401 - 5492572 bp
Length : 2172 bp
Strand : +
Note : TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: dac:Daci_2453 TonB-dependent siderophore receptor

DNA sequence :
TTGTTCAAGCAAAAGAAGTGCGCCGCACTGGTCATGGCGCTGTTCCCCATCAGCTTCCAGAGCCTGGCGGCCGAAGCCGA
GCCGGCCGGTGCCGCATCCGGCGCGAAATCGCTGGAGGCGGTGACCGTCACCGGCGACTGGCTCGGCACGCCCAGCGAGA
CCAAGGTGCTCGAGCACCCGGGCGCGCGCAGCATCATCGAGCGCACGCAGATCCAGGAAAGCGGCGCCACCAGCGTGCGC
GAGGCGCTGCGCCAGGTTCCCGGCGTGCAGGTGCAGGAGAGCAACGGCACGGGCGGCAGCGACATCTCGCTCAACGTGGG
CGTGCGCGGCCTCACCTCGCGGCTGTCGCCGCGCTCGACCATCCTGCTGGACGGCGTGCCGCTGGCCTATGCACCCTACG
GCCAGCCGCAGCTGTCGCTGGCGCCGCTGTCGCTCGGCAGCCTGGAAGCGGTCGACGTGGTGCGCGGCGCGGGCTCGGTG
CGCTACGGCCCGCAGAACGTGGGCGGCATCATCAACTTCGTGACGCGCTCGATTCCCAAGCAGTTCGCGGGCGAAGTGAG
CGTGGGCGTGGAAGGCGCGGGCCACGGCGGCGGCACCAAGACCACGCCCAGCCTGTTCGTGGGCGGCACCAACGAGAACG
GCCTGGGCCTGGCGCTGCTGTATTCGGGCACGCACGGCGACGGCTTTCGCCGGAGCAACGACCACACCAGCATCGACGAC
CTGATGCTCAAGGGCGCCTACCGCCTGTCGAAGACCGACGACATCGCGGTGACGCTGCATCACTTCGAGGGCAAGGGCCG
CATGCCGGGCGGGCTGACCACCGCGCAGTTCGCGGCCGACCCGTTCCAGTCGGACCGTCCGTTCGACGAATTCACGGGAC
GCCGTACCGACGGCTCGGTCAAGTACACGCACGACGACGGCGTGAACAAGTTCGAGATGCTGAGCTACTACACGGACTCC
TACCGCAGCAGCTACCTCGAGCAGGAAGGCACCGGTGCCAACACGGGCCGGCGGCGCCTGACCTCCGCGCCGCGCAACTA
CAAGACCTACGCCTTCGAGCCCCGCTACTCGCGCCTGATCGACTCGGGCAGCGTGGTGCAGGAGATCAGCGTCGGCGCGC
GCTACCTCAAGGAAGAGGCCTCCGAGGTGGCGACGCGCAGCGGCTACTACCCGCCGCGCCCGGGCTTCGATGCCTACGCG
CTCGCCCAGCCGGCTTACCAGTCGAGCAAGGGCGGCACCACCGCCCATGCGGTCTACATCGACGACCGCATCGACTTCGG
CAACTGGACGGTCACGCCCGGCGTGCGCTACGAATCGATCCGCTCGCACAACGACGTCTTCACGCTGGCCAACGGCCGGG
TCACCGGCGCGAACTATCCGAAGATCGACTCCAACGAAGTGCTGCCGACGCTGTCGGTGCTCTACCGCATGAACGAGCGC
TGGTCGGTGTTCGCGAACGCCGGCGTGTCGTTCGGGCCGCAGCAGTATGCGCAGCTCGCGCAGTCCACCAGCGGCCTGCA
CCCCGAGAAGGCCAAGACGTACGAGATCGGCACGCACTACAAGGGCGAGGCCTGGAGCGGCGAGCTCACGCTGTTCAACA
TCAACTTCGACAAGGAACTGCTGCTGGCCCGCTCCATCACCGGCGACGTCGGCCAGTGGACCGACCTGGGCGCCACGCGG
CACCGCGGCCTGGAGTCGGCGCTGCGCTACCAGCTCGGCAGCCTGAGCGATTCGCTCAAGGGCCTGTCGGTGTCGGCCAC
CTACACCTACACGCAGGCGATTGCCAAGGCCGGGGCCTTTGCCGGCCGCGACCTGCCCTTCTACTCGCGCCAGGTGGCCA
CGCTCGGCGCGCGCTACGAGCGCGGGCCCTGGACCTTCAATGCCGACGTGTACGCGCAGTCGAAGCAGCGCTCGCCGGGC
TCGCCAGACGACGGCGCGCAGTACATCACGCTGGAAGACCCGAACGGCCGGCTCGGCAACATTCCGGGCTACGCCACCAT
GAACCTGCGCGCGGCGTACGACTTCGGCCCCTCGATGAGCAACCTGAAGCTCGCCGTCGGCATCAAGAACCTGTTCGACC
GCCGCTACTACAACCGCTCGGTCGACAACAACGGCGGCAAGTACGTGGGCCAGCCGCGCACGGTGTACCTGCAGGCCTCG
GTGGCGTTCTGA

Protein sequence :
MFKQKKCAALVMALFPISFQSLAAEAEPAGAASGAKSLEAVTVTGDWLGTPSETKVLEHPGARSIIERTQIQESGATSVR
EALRQVPGVQVQESNGTGGSDISLNVGVRGLTSRLSPRSTILLDGVPLAYAPYGQPQLSLAPLSLGSLEAVDVVRGAGSV
RYGPQNVGGIINFVTRSIPKQFAGEVSVGVEGAGHGGGTKTTPSLFVGGTNENGLGLALLYSGTHGDGFRRSNDHTSIDD
LMLKGAYRLSKTDDIAVTLHHFEGKGRMPGGLTTAQFAADPFQSDRPFDEFTGRRTDGSVKYTHDDGVNKFEMLSYYTDS
YRSSYLEQEGTGANTGRRRLTSAPRNYKTYAFEPRYSRLIDSGSVVQEISVGARYLKEEASEVATRSGYYPPRPGFDAYA
LAQPAYQSSKGGTTAHAVYIDDRIDFGNWTVTPGVRYESIRSHNDVFTLANGRVTGANYPKIDSNEVLPTLSVLYRMNER
WSVFANAGVSFGPQQYAQLAQSTSGLHPEKAKTYEIGTHYKGEAWSGELTLFNINFDKELLLARSITGDVGQWTDLGATR
HRGLESALRYQLGSLSDSLKGLSVSATYTYTQAIAKAGAFAGRDLPFYSRQVATLGARYERGPWTFNADVYAQSKQRSPG
SPDDGAQYITLEDPNGRLGNIPGYATMNLRAAYDFGPSMSNLKLAVGIKNLFDRRYYNRSVDNNGGKYVGQPRTVYLQAS
VAF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fecA AAL08456.2 FecA Not tested SRL Protein 6e-127 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Vapar_5169 YP_002947037.1 TonB-dependent siderophore receptor VFG1047 Protein 3e-127 44