Gene Information

Name : Vapar_0550 (Vapar_0550)
Accession : YP_002942479.1
Strain :
Genome accession: NC_012791
Putative virulence/resistance : Virulence
Product : type VI secretion protein
Function : -
COG functional category : S : Function unknown
COG ID : COG3516
EC number : -
Position : 610153 - 610671 bp
Length : 519 bp
Strand : -
Note : TIGRFAM: type VI secretion protein, VC_A0107 family; PFAM: conserved hypothetical protein; KEGG: azo:azo3895 cytoplasmic protein,SciH

DNA sequence :

ATGGCCAAGAGCAGTCAGAAATTCATCGCCCGCAACCGGGCGCCACGCGTGCAGATCGAGTACGACGTGGAACTCTACGG
CGCCGAGAAGAAGATCCAGCTGCCCTTCGTGATGGGCGTGCTGGCCGACCTGTCGGGCAAGCCGGCCGATCCGCTCGCGC
CCGTGGCCGACCGCAAGTTCCTCGAGTTCGACGTGGACAACTTCGACTCGCGCATGAAGGCCATGAAGCCGCGCGCCGCC
TTCGCGGTGGAGAACTCGCTGACCGGCGAAGGCGAGCTCAAGGTCGAGCTCACCTTCGAGAACATGGAAGACTTCTCGCC
CGCCGCCGTGGCCAGGAAGGTCGGCGCGCTCGACAAGCTGCTCGAGGCGCGCACCCAGCTGTCGAACCTCGTGACCTACA
TGGACGGCAAGAACGGCGCCGAGGAACTGCTGGCCAAGGTGCTCGAGGACCCGGCCCTGCTGCAGTCGCTGGCGGCCACC
GCCAAGCCCGACGACGAAGCGGCCAAGCCGGCCGCCTGA

Protein sequence :

MAKSSQKFIARNRAPRVQIEYDVELYGAEKKIQLPFVMGVLADLSGKPADPLAPVADRKFLEFDVDNFDSRMKAMKPRAA
FAVENSLTGEGELKVELTFENMEDFSPAAVARKVGALDKLLEARTQLSNLVTYMDGKNGAEELLAKVLEDPALLQSLAAT
AKPDDEAAKPAA

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
STY0297	NP_454879.1	conserved hypothetical protein	Not tested	SPI-6	Protein	2e-56	71

• Homologs from VFDB (virulence genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
Vapar_0550	YP_002942479.1	type VI secretion protein	VFG2069	Protein	1e-58	78