Gene Information

Name : DMR_16320 (DMR_16320)
Accession : YP_002953009.1
Strain : Desulfovibrio magneticus RS-1
Genome accession: NC_012796
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1804660 - 1805343 bp
Length : 684 bp
Strand : -
Note : -

DNA sequence : 
ATGGACCGCCCGCTTATCGAAATATCGCACCTGTCGAAATCCTACCAACGCGGCGATCAGGTGATCCCGGTGCTCTCCGA
CATCACCTTCGACATCGCTGCCGGGGAGTTCCTGGCGCTCATCGGCCCGTCGGGGTCCGGGAAATCGACGCTCCTCAACT
GCATCGCCGGCATCGATTCCCTGGACGCCGGCAGCATCACCGTGGCCGGCACGGACATCGCCACCTTGTCGGAAAGCGAA
CTGGCCGTGTGGCGAAGCCGCCACGTGGGCTTTATCTTCCAGTTCTACAACCTCATTCCGGTGCTGACCGCCCTGGAAAA
CGTCGAGCTGCCGCTTTTGCTCACAAGCCTGTCCGCCGCCGCCCGGCGCGACCACGCCCTGGCCGCCCTGGCCGCCGTGG
GCCTGTCCGACCGCACCGACCACAAGCCCAACCAGCTTTCCGGCGGCCAGCAGCAGCGCGTGGCCATCGCCCGGGCCATC
GTCACCGACCCGGACATCATCGTGGCCGACGAACCCACCGGCGACCTGGATAGGGTCTCGGCCGCCGACGTCATGGCCCT
GCTCAAGCGCTTAAACGCCGACCTGGGCAAGACCATCGTCATGGTCACCCACGACCACAAGGCCGCCGAGGCCGCCCACC
TCGTGCGCGAGCTCGACAAGGGCGAACTGCGTGTTGCTCCTTAG

Protein sequence : 
MDRPLIEISHLSKSYQRGDQVIPVLSDITFDIAAGEFLALIGPSGSGKSTLLNCIAGIDSLDAGSITVAGTDIATLSESE
LAVWRSRHVGFIFQFYNLIPVLTALENVELPLLLTSLSAAARRDHALAALAAVGLSDRTDHKPNQLSGGQQQRVAIARAI
VTDPDIIVADEPTGDLDRVSAADVMALLKRLNADLGKTIVMVTHDHKAAEAAHLVRELDKGELRVAP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 3e-28 43
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-26 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-26 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 3e-26 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-26 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
DMR_16320 YP_002953009.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 9e-35 48
DMR_16320 YP_002953009.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 8e-30 47
DMR_16320 YP_002953009.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 2e-35 41