Gene Information

Name : Rpic12D_1625 (Rpic12D_1625)
Accession : YP_002981581.1
Strain :
Genome accession: NC_012856
Putative virulence/resistance : Resistance
Product : MarR family transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG1846
EC number : -
Position : 1729429 - 1729893 bp
Length : 465 bp
Strand : +
Note : KEGG: rso:RSc1592 transcription regulator protein; TIGRFAM: homoprotocatechuate degradation operon regulator, HpaR; PFAM: regulatory protein MarR; SMART: regulatory protein MarR

DNA sequence :
ATGGCTTCCGCCTTCAAGCACCGCAATCTGCCGCATCTGCTGCTGCGCGCGCGTGAGACCTTCATGGCGCGTTTTCGCCC
GATCCTGCGCGAGCGCGGCATCACCGAGCAGCAATGGCGCGTGCTGCGTACGCTCAACGATACCGGCGACATGGAGCCCA
ACCAACTCGCCGATGCATGCCTGATCCTGAGCCCAAGCCTGACGCGCATGCTGGCGGCAATGGAGCAGTCCGAGATGATC
GTGCGTACGAAGTCATCGGTGGATCAGCGCCGCCAGGTGATTTCGCTCACACCCAAAAGCCGCCAGTTCCTGGCCGACGT
TGAACCGCAGGTGGATGCGGAATACGCGCGCATCGAAGCACAGTTGGGCCGCGCGCGGCTGGACGCGCTCTACGCAGCCA
TTGATGAGTCGATCCAGGTCATGGAAACGCACACGCCCATGGGCCGCTTCATCGGCGACGAGTAA

Protein sequence :
MASAFKHRNLPHLLLRARETFMARFRPILRERGITEQQWRVLRTLNDTGDMEPNQLADACLILSPSLTRMLAAMEQSEMI
VRTKSSVDQRRQVISLTPKSRQFLADVEPQVDAEYARIEAQLGRARLDALYAAIDESIQVMETHTPMGRFIGDE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hpcR AAO17176.1 HpcR Not tested tcd island Protein 5e-19 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Rpic12D_1625 YP_002981581.1 MarR family transcriptional regulator BAC0505 Protein 5e-22 41