Gene Information

Name : Rpic12D_1628 (Rpic12D_1628)
Accession : YP_002981584.1
Strain :
Genome accession: NC_012856
Putative virulence/resistance : Unknown
Product : 5-carboxymethyl-2-hydroxymuconate isomerase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG3232
EC number : -
Position : 1731543 - 1731932 bp
Length : 390 bp
Strand : -
Note : PFAM: 5-carboxymethyl-2-hydroxymuconate isomerase; KEGG: bur:Bcep18194_B1779 5-carboxymethyl-2-hydroxymuconate isomerase

DNA sequence :
ATGCCGCACGTCATTGTCGAATACACCGACAACCTGGGCGACGACGCCTGCATTCCGGAATTGCTGCAAGCGATGAACGA
AACGCTGATGGCGCAGAACGGCGTATTTCCGACTGGCGGTATCCGCTCGCGCGCCATCAAGCTGACCGAGTACCGTGTGG
CCGACGGCAAAGAGGACGACGCTTTCGTTCACGTCACGTTCAAAATCGCAGGGGGTCGCACGCCTGAGGTCAAGAAGGCC
GCCTGCGACGCGCTGTTCGAGGCGATCAAGGCACATTTTGCGCAGGCCTTTGCGCGCCGTTATCTGGCGCTGTCGATGGA
GTTGACCGAGTTCGACGAGGGCGGCAGCTACAAGCACAACAACATCCACGCGCGTTTTCGCAAGGCTTGA

Protein sequence :
MPHVIVEYTDNLGDDACIPELLQAMNETLMAQNGVFPTGGIRSRAIKLTEYRVADGKEDDAFVHVTFKIAGGRTPEVKKA
ACDALFEAIKAHFAQAFARRYLALSMELTEFDEGGSYKHNNIHARFRKA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hpaF AAO17181.1 HpaF Not tested tcd island Protein 2e-24 50