Gene Information

Name : Rpic12D_1689 (Rpic12D_1689)
Accession : YP_002981644.1
Strain :
Genome accession: NC_012856
Putative virulence/resistance : Unknown
Product : type VI secretion system lysozyme-like protein
Function : -
COG functional category : S : Function unknown
COG ID : COG3518
EC number : -
Position : 1799230 - 1799751 bp
Length : 522 bp
Strand : +
Note : TIGRFAM: type VI secretion system lysozyme-related protein; PFAM: GPW/gp25 family protein; KEGG: reh:H16_A0648 hypothetical protein

DNA sequence :
ATGTCTGAACATCGCCCTCCCATCCGCCCCAACGCACAACTGCTGCCGACACTCTTTGACCGGTTGCGCGACGCTGCACC
ACAGCGGCAAACGGAAGCCGCCAACGAATACACGGTCACGCGCACGCAGATGCGCGAGATCCTCCAGCGCGATCTGACGT
ACCTGCTCAACACCACGAATCGCGAAGACGAGATCGATCGGACACGCTACCCAGAGGCGGCAAGTTCCACCATCAACTAT
GGGGTACCGCCGGTGGCCGGCAGCTATCTGTCGGAACACAAGTGGACCGACATCGTCAAGATCGTGCGCCGCGCGATTCT
GGATTTCGAGCCACGGCTCATTCCTGGCTCGCTGGAAGTCAAGCCGTTGCTCAAGGAAGACGCGCCAACTCGCTACAACG
TGCTGCTGTTCGAGATCAGCGGGCTGATCCACATGGACCCGTACCCGATGGCCTTTACCGCGCAGAGCTCGCTCGATCTG
GAAACTGGCCACATGAACGTTCGCTCACTTCACGCCCACTGA

Protein sequence :
MSEHRPPIRPNAQLLPTLFDRLRDAAPQRQTEAANEYTVTRTQMREILQRDLTYLLNTTNREDEIDRTRYPEAASSTINY
GVPPVAGSYLSEHKWTDIVKIVRRAILDFEPRLIPGSLEVKPLLKEDAPTRYNVLLFEISGLIHMDPYPMAFTAQSSLDL
ETGHMNVRSLHAH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0290 NP_454872.1 conserved hypothetical protein Not tested SPI-6 Protein 4e-36 51