Gene Information

Name : Rpic12D_2443 (Rpic12D_2443)
Accession : YP_002982387.1
Strain :
Genome accession: NC_012856
Putative virulence/resistance : Virulence
Product : heme exporter protein CcmC
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0755
EC number : -
Position : 2561131 - 2561916 bp
Length : 786 bp
Strand : +
Note : TIGRFAM: heme exporter protein CcmC; PFAM: cytochrome C assembly protein; KEGG: cti:RALTA_B0646 ABC transporter, heme transfer protein, cytochrome C-type biogenesis

DNA sequence :
ATGACGAATCGATCCGGACTCCACACCACGCCCATCGCCGTGCGCCAACCTGCGTCGCGACGCTGGAACTGGCTCGCGTA
TGCGTCGCCCGTGCGGTTTGATCCGCTCGCGCGCAAGCTCGCACCGTGGTTTGGTGCAGCAGCTCTCTTGTTCCTCGTCG
CCGGCCTCTACGTCGGCTTCGTGGTGGCGCCCACCGATGCGCAGCAGGGCGAGGTCTATCGCATCATCTTCCTGCACGTG
CCGGCCGCGTGGATGTCGATGTTCGTCTACCTGGTGATGGCGGGCTATTGCGCGCTGGCGCTGGTGCTGCGCACGCGGCT
TTCGTTGATGATGGCCTCGGCGCTGGCGCCCACCGGCGCACTGTTCACCGCCATTGCGCTGTGGACAGGCGCGCTGTGGG
GCAAGCCAACGTGGGGCACATGGTGGGTGTGGGATGCGCGGCTGACGTCGGAGTTGCTGCTGCTGTTTCTGTACCTGGGC
TTCATCGCGCTGGAGAGCGCCATTGAAGACCCCCGCCGTGCCGAGCGCGCCTGCGCCTTGCTAGCCGTGGTGGGCGTGGT
CAACATCCCCGTGATCTATTTCTCGGTGCAGTGGTGGAACACGCTGCATCAAGGCGCATCCGTCAGCCTGACGGCGGCTC
CGTCGATGGCGATGACGATGCTGCTCGGCATGCTGCTGATGACGCTCGCGTGCTGGATGTACAGCATCTGCGTGGCGCTG
ATTCGCGTGCGCTGCATCGTGCGCGAGCGCGCCGACGATGACCACAACCTGAGCACGCCGGCATGA

Protein sequence :
MTNRSGLHTTPIAVRQPASRRWNWLAYASPVRFDPLARKLAPWFGAAALLFLVAGLYVGFVVAPTDAQQGEVYRIIFLHV
PAAWMSMFVYLVMAGYCALALVLRTRLSLMMASALAPTGALFTAIALWTGALWGKPTWGTWWVWDARLTSELLLLFLYLG
FIALESAIEDPRRAERACALLAVVGVVNIPVIYFSVQWWNTLHQGASVSLTAAPSMAMTMLLGMLLMTLACWMYSICVAL
IRVRCIVRERADDDHNLSTPA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ccmC AAN62109.1 putative heme exporter protein C Not tested PAGI-2(C) Protein 9e-48 72

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Rpic12D_2443 YP_002982387.1 heme exporter protein CcmC VFG1856 Protein 5e-23 45