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Name : Rpic12D_2446 (Rpic12D_2446) Accession : YP_002982390.1 Strain : Genome accession: NC_012856 Putative virulence/resistance : Unknown Product : cytochrome C-type biogenesis protein CcmF Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG1138 EC number : - Position : 2562526 - 2564544 bp Length : 2019 bp Strand : + Note : TIGRFAM: cytochrome C-type biogenesis protein CcmF; PFAM: cytochrome C assembly protein; KEGG: reh:PHG218 cytochrome C-type biogenesis protein DNA sequence : ATGATCGCCGAGCTGGGCCACTTCGCGTTGATCCTCGCGCTGCTGACTGCGGCCATGCAATCCGTGTTGCCGCTGGTTGG TGCGGCGCGCGACGACGAGCGCTGGATGGCCGTGGCGCGTCCCGCTGCACGCATGCAGTGCGCATTGGTGCTGCTGGCTT ATGGCGCACTGACGTGGGCGTTCGTCAGCAACGATTTCAGCGTGCTCTATGTCGCCGCCAACTCGAACAGCGCGCTGCCG CTGCCCTATCGGGTGGCGGCCGTATGGGGCGGGCACGAGGGATCGATGTTGCTGTGGACGACGATGCTGGCGCTGTGGTC GCTGGCCGTGTCGTTGTTCAGCCGGCAACTGCCGTTGCCCGTCGTGGCGCGCGTGCTGGGCGTGATGGGCGCCATCAGCA CGGGGCTGCTGCTCTTCCTGCTGTTCGCATCCAACCCGTTCCTACGCCTGTTGCCGCCGGCCATGGAAGGGCGTGATCTC AATCCGCTGTTGCAAGACCCGGGCATGGTGTCGCATCCGCCCATGCTCTACATGGGTTACGTGGGCTTTGCGGTGGCGTT CTCGTTTGCGATGGCCGCGCTCCTATCGGGCCGGCTCGACGCCACCTGGGCGCGCTGGTCTCGGCCGTGGACCACCGCCG CCTGGGCATGCCTGACGACCGGCATCATGCTCGGCAGCGCTTGGGCGTACTACGAACTTGGCTGGGGCGGTTGGTGGTTC TGGGACCCGGTCGAAAACGCTTCGTTCATGCCGTGGCTGGCAGGCACGGCGCTGATCCACTCGTTGGCGGTAACGGAAAA GCGCGGCGTGTTCCGCGCATGGACGGCGCTGCTGGCCATCTTCACGTTCTCGCTCAGTCTGCTCGGCACGTTCCTCGTCC GCTCGGGCGTGCTGACGTCGGTGCATGCTTTTGCGGTCGACCCGAAGCGCGGTCTCTTCATCCTCGCTTTGCTGGGCATC GTGACGGGCGGCGCCCTCGGTCTGTTTGCGTGGCGCGCGAAGCGGTTGTCCAGCAACGCGTCGGAAGGCGCGACGTTCCC GCTGTTCGCGCGTGAATCGTTCCTGCTGGCCAACAACGTGCTGCTGGCGGTGGCGGCCGCCACGGTATTGCTTGGCACGC TGTATCCGCTTTTGCTGGATGTGCTGCGGCTGGGCAAGATCTCGGTCGGGCCGGCGTATTTCGAACAGGTCTTTGTGCCG CTGATGTCTCCTGCGGTGCTGCTGATGGGTGCCGCGCCACTGGCACGCTGGCGTCACGGTGCGCTGCCGTCGATGGCGGT GCGGCTGCGATGGGCAGCAGTGGCGAGTGTTGCCGTCGGGCTCGGACTGGCGGTGATGTATCGGACGTCCGCGCTGGCGG GCCTGGGGCTGACGCTCGCCGCATGGTGTCTTCTGAGTGCGCTGGCCAGTCTGGCCGAAAAGCTTCGCCAGCCCGGCAAT CGATTGACGACGCTGCGGCAATTGCCGCCGAGCTACTTTGGCATGCTAGTGGCGCACGCGGGGGTCGGCGTGTTCATTGC GGGCGTCACGCTGGTGCTCAGCCAGGAGACGCTACGCGAGTTGCCGGTGCGCGTGGGCGGCAAGGTGGAGGTGGGCGGCT ACATGTTCCACCTCACCAGCGTTGCGCCGGCCCAGGGCCCCAATTACGACGTCTTGCGCGGCCACGTTGAAGTCAGCCGC AACGGCAAACCCGTGGCCACGCTGCTACCCGAGCGGCGCCTGTACCACAGCCAGGAAACTCCCACGACCGAAGTCGCCAT CGACAGCGGCATCACACGCGATCTCTATGTCGCGCTTGGTGAATCACTCGGACAAGACAACTGGGCCATGCGCATCTACA TCAAGCCCTTCGTCAGCTGGATCTGGAGCGGCTGTGTGCTGATGGTACTGGGCGGCCTGCTGGCCGTGTGCGACCGCCGC TACCGGCTGCGCCGCCGCTCCACGTCATCGCGCGCCGCGCCCGACACTGCACGCGGCGGCCCGTCATTAGCGATGCCAGC GACCGAGGAGCTACGGTGA Protein sequence : MIAELGHFALILALLTAAMQSVLPLVGAARDDERWMAVARPAARMQCALVLLAYGALTWAFVSNDFSVLYVAANSNSALP LPYRVAAVWGGHEGSMLLWTTMLALWSLAVSLFSRQLPLPVVARVLGVMGAISTGLLLFLLFASNPFLRLLPPAMEGRDL NPLLQDPGMVSHPPMLYMGYVGFAVAFSFAMAALLSGRLDATWARWSRPWTTAAWACLTTGIMLGSAWAYYELGWGGWWF WDPVENASFMPWLAGTALIHSLAVTEKRGVFRAWTALLAIFTFSLSLLGTFLVRSGVLTSVHAFAVDPKRGLFILALLGI VTGGALGLFAWRAKRLSSNASEGATFPLFARESFLLANNVLLAVAAATVLLGTLYPLLLDVLRLGKISVGPAYFEQVFVP LMSPAVLLMGAAPLARWRHGALPSMAVRLRWAAVASVAVGLGLAVMYRTSALAGLGLTLAAWCLLSALASLAEKLRQPGN RLTTLRQLPPSYFGMLVAHAGVGVFIAGVTLVLSQETLRELPVRVGGKVEVGGYMFHLTSVAPAQGPNYDVLRGHVEVSR NGKPVATLLPERRLYHSQETPTTEVAIDSGITRDLYVALGESLGQDNWAMRIYIKPFVSWIWSGCVLMVLGGLLAVCDRR YRLRRRSTSSRAAPDTARGGPSLAMPATEELR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ccmF | AAN62106.1 | putative cytochrome C-type biogenesis protein CcmF | Not tested | PAGI-2(C) | Protein | 7e-141 | 57 |
| ccmF | YP_217241.1 | cytochrome c-type biogenesis protein | Not tested | SPI-12 | Protein | 1e-112 | 53 |
