Gene Information

Name : Rpic12D_0260 (Rpic12D_0260)
Accession : YP_002980239.1
Strain :
Genome accession: NC_012856
Putative virulence/resistance : Unknown
Product : 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG0179
EC number : 4.1.1.68
Position : 272431 - 273132 bp
Length : 702 bp
Strand : +
Note : PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: rso:RSc0383 hypothetical protein

DNA sequence :
ATGACCGATTTCGTCGTCACCCCGCCCGCCGTCAATGGCATTCCCGTGCGTGGCGGGCATGGCCAGTTTCCGGTGCGCCG
TGTGTACTGCGTCGGCCGCAACTACGCCGCCCACGCGCGCGAGATGGGTTCCGACCCCGACCGCGAACCGCCGTTCTTCT
TCTGCAAGCCGGCCGACGCCGTGCGCTATATCCCCGATGGCGAGACCGGCCAGTTCGTTTACCCGACTGAAACCCGCGAT
TGCCACTACGAGATCGAACTCGTGGTCGCCATCGGCACGGGCGGGCGCGACATCGCCGTGGAAACGGCAGCCAACCATGT
CTACGGTTACGCCATCGGCCTGGACATGACGCGCCGCGACCTGCAGAACGCGGCAAAGAAGGGCGGCCGCCCCTGGGAGA
CCGGCAAGGCTTTCGACGGCTCGGCGCCCATCGGCCCGATCGTGCCGGCCAAGGATGTGGCGCATCCGGACAAGGGCGCC
ATCACGCTGTCGGTCAACGGCCGCGAACACCAGCGCGGTGACCTGTCGGACCTGATCTGGTCGGTGCCGGAAACCATTGC
GTATCTGTCGCGCCTGTTCGAGCTGCGCCCCGGCGATCTGATCTACACCGGCACGCCCGAAGGCGTTGGCCCGGTCGTCG
TCGGCGACCTGATGGTCGGCAAGATCGACGGCGTGGGAGAGCTGCACGTGAAGGTTATTTGA

Protein sequence :
MTDFVVTPPAVNGIPVRGGHGQFPVRRVYCVGRNYAAHAREMGSDPDREPPFFFCKPADAVRYIPDGETGQFVYPTETRD
CHYEIELVVAIGTGGRDIAVETAANHVYGYAIGLDMTRRDLQNAAKKGGRPWETGKAFDGSAPIGPIVPAKDVAHPDKGA
ITLSVNGREHQRGDLSDLIWSVPETIAYLSRLFELRPGDLIYTGTPEGVGPVVVGDLMVGKIDGVGELHVKVI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAI43829.1 putative isomerase Not tested LEE Protein 4e-61 63