Gene Information

Name : Rpic12D_0306 (Rpic12D_0306)
Accession : YP_002980284.1
Strain :
Genome accession: NC_012856
Putative virulence/resistance : Virulence
Product : histidine kinase
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG2205
EC number : -
Position : 316530 - 318026 bp
Length : 1497 bp
Strand : -
Note : PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: pol:Bpro_0544 periplasmic sensor sign

DNA sequence : 
ATGAGTGGACGAGGGGAGGCAGTGCTATCTCGACGGCTCTCGCTGGTATTCGCTGTGCTGTTGCTGGTGTGCTGCGGCAC
TTCGGCTTGGCTGCAATTGCGCTCGAACGGACGTCACGAGCAGGAGGTGATCCAACGCTTGTCGAGCGGGTTGGCCGCAC
ACATCGCGGAGAATGCCGAACTGATGCGACCGGAAGGACTAAACCCTGTCGCGGTGAAGGATCTGTTCGACAAACTGATG
GCGGTGAATCCTAGCGTAGAGGTCTACCTGCTCTCGCCTGACGGCCACATTGCGGCGCAAGCGGCGCCCCCCGGCCACCT
CAAGCGCGACCGCGTCGACCTCGCGCCGGTGCGCAGACTGCTCGCTGGTGCGACGATGCCGGTCCTCGGTGACGATCCAC
GCAACTTGCAAACGCCCAAAGTTTTTAGCGCCGCGCCGATGCGCGTTGATGGCCGAGACGCAGGTTACGTCTACGTGGTG
CTGCAGGGCGAGGACCACGACGCCGTTGCCGCGCACGTGGCGGCTGACAACGTTTTGCGGACAACGCTGTGGTCCATGGG
GCTGGTGGCTCTTCTCGGGCTTGTAGCGGGCACGATGGCGTTCTGGCTCATCACGCGGCCTCTGCGCGAGCTGACGGCTG
TAGTCCGACGCTTCGAATCCGAAGGAATCGGATCGCTCGAAAGCCAAACGGCCACACTCGAGCGCATTGCGCGCGGTGGC
GGAGAAATAGCGACACTGAGCCAGGCCTTCGTGCAGATGACGCGGCGCATCGCTGAGCAGTGGCGAGAGCTGACCCTGCA
GGACCAGCAGCGCCGCGAACTCGTCGCCAATATCTCGCATGACCTGCGCACGCCCCTGACTTCACTACACGGCTACCTGG
AAACGCTCCGACTGAAGGCCGGTATCCTCGACGACGAAGAGCGCCGCCGCTACCTCGACATTGCGCTCGGTCAGAGCCGC
AAGGTTGGCCGGCTCGCACAGGAGCTATTTGAGCTAGCGCGGCTTGAGTACGGCGTGGTTAAGCCAGAAAAGGAAAATTT
CGCGTTGGCCGACCTGGTACAAGACGTGTTTCAGAAGTTCGAGTTGGCAGCAGGGGCGCGTCAGCAACAACTCAAGCCAG
ACATTGCGCCCGGTCTACCCATCGTGTCGGCCGACTTGGGCATGATCGAGCGCGTGCTAACAAACCTGCTCGACAACGCC
ATCCACCATACGCCAGTAGGCGGCGCGATCGAGGTGCAGTTGCGTCCAACGAACACTGGGGTCGCGGTCCAGGTTAGCGA
CACCGGGCCGGGTATCCCGGGTGAACTTCAGAAGGGACTCTTCGTGCGTCCAGTGTTCATGAGCGGTGCCCGCAGCGATG
GCTCACGCAGCGGTGGGCTCGGGCTGATGATCGTGCAGCGAATCCTGCAGCTGCATGGCAGCGAAATCCGGCTGGTGCCG
CAGCCCGGAAAGGGTGCGGTGTTTCGCTTCCAGTTGGCGGGTGCCGCGAGTGGGTGA

Protein sequence : 
MSGRGEAVLSRRLSLVFAVLLLVCCGTSAWLQLRSNGRHEQEVIQRLSSGLAAHIAENAELMRPEGLNPVAVKDLFDKLM
AVNPSVEVYLLSPDGHIAAQAAPPGHLKRDRVDLAPVRRLLAGATMPVLGDDPRNLQTPKVFSAAPMRVDGRDAGYVYVV
LQGEDHDAVAAHVAADNVLRTTLWSMGLVALLGLVAGTMAFWLITRPLRELTAVVRRFESEGIGSLESQTATLERIARGG
GEIATLSQAFVQMTRRIAEQWRELTLQDQQRRELVANISHDLRTPLTSLHGYLETLRLKAGILDDEERRRYLDIALGQSR
KVGRLAQELFELARLEYGVVKPEKENFALADLVQDVFQKFELAAGARQQQLKPDIAPGLPIVSADLGMIERVLTNLLDNA
IHHTPVGGAIEVQLRPTNTGVAVQVSDTGPGIPGELQKGLFVRPVFMSGARSDGSRSGGLGLMIVQRILQLHGSEIRLVP
QPGKGAVFRFQLAGAASG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
c3564 NP_755439.1 hypothetical protein Not tested PAI I CFT073 Protein 6e-91 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Rpic12D_0306 YP_002980284.1 histidine kinase VFG1701 Protein 2e-91 44