|
Name : Rpic12D_0949 (Rpic12D_0949) Accession : YP_002980921.1 Strain : Genome accession: NC_012856 Putative virulence/resistance : Unknown Product : cysteine desulfurase IscS Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG1104 EC number : - Position : 1000622 - 1001839 bp Length : 1218 bp Strand : + Note : TIGRFAM: cysteine desulfurase IscS; PFAM: aminotransferase class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: rso:RSc1019 pyridoxal-phosphate-dependent aminotransferase (NifS protein) DNA sequence : ATGAGCACCCCGCAACTTCCCATCTACATGGACTATTCCGCGACGACGCCGGTGGACCCGCGCGTGGTCGACAAGATGAT TCCGTATCTGCGCGAGAGCTTCGGTAACCCGGCTTCGCGCAGCCACCCGTTTGGCTGGGAAGCCGAGAAGGCCGTCGAGA CCGCGCGCGAGCAGGTCGCCGCGCTGGTGAATGCCGACCCGCGCGAAATCGTCTGGACGTCGGGTGCGACCGAATCCGAC AACCTGGCAATCAAGGGCGCTGCCAACTTCTACAGCAGCAAGGGCAAGCACATCATCACCGTGAAGACCGAGCACAAGGC TGTGCTGGACACGACGCGTGAGCTGGAGCGCCAGGGCTTCGAGGTGACCTACCTGGACGTGAAGGACAACGGCCTGATCG ATATCGACGTCTTCAAGCAAGCCATCCGCCCCGACACCATTCTGGCGTCGGTGATGATGGTGAATAACGAGATCGGCGTC ATTCAGGACATCGAGCAGCTCGGCGAAATCTGCCGCGAAAAGGGCGTGATTTTCCACGTCGATGCTGCCCAGGCCACGGG CAAGGTTGAAATTGACCTGCAGAAGCTGAAGGTCGACCTGATGTCGTTCTCGGCGCATAAGACGTATGGTCCGAAGGGCA TCGGGGCGCTGTACGTGCGCCGCAAGCCGCGTATCCGCATCGAAGCGCAGATGCACGGCGGTGGCCACGAGCGCGGCATG CGTTCGGGCACGCTGGCGACGCATCAGATTGTGGGCATGGGCGAGGCCTTCCGCATCGCCAAGGAAGAAATGGCGACCGA GAACGAGCGCATCCGCATGCTGCGCGACCGCCTGTATCGCGGCCTGAACACGATGGAAGAGGTGTACGTGAACGGCGACA TGGAAGCCCGTGTGCCGCACAACCTGAACATCAGCTTCAACTTTGTGGAAGGCGAGTCGCTGATCATGGCGATCAAGGAC GTCGCCGTGTCGTCGGGCTCGGCCTGCACGTCGGCCTCGCTGGAACCTTCGTACGTGCTGCGTGCGCTGGGTCGCAACGA TGAACTCGCGCACAGCTCGATCCGCTTCACGGTGGGCCGCTTCACGACGGAAGAAGAAGTCGACTACGTGGTCGAGCTGC TCAAGAGCAAGATCGGCAAGCTGCGCGACCTGTCTCCGCTGTGGGAGATGTATAAGGACGGCGTGGATCTGAACAGCATT CAATGGGCGGCGCACTGA Protein sequence : MSTPQLPIYMDYSATTPVDPRVVDKMIPYLRESFGNPASRSHPFGWEAEKAVETAREQVAALVNADPREIVWTSGATESD NLAIKGAANFYSSKGKHIITVKTEHKAVLDTTRELERQGFEVTYLDVKDNGLIDIDVFKQAIRPDTILASVMMVNNEIGV IQDIEQLGEICREKGVIFHVDAAQATGKVEIDLQKLKVDLMSFSAHKTYGPKGIGALYVRRKPRIRIEAQMHGGGHERGM RSGTLATHQIVGMGEAFRIAKEEMATENERIRMLRDRLYRGLNTMEEVYVNGDMEARVPHNLNISFNFVEGESLIMAIKD VAVSSGSACTSASLEPSYVLRALGRNDELAHSSIRFTVGRFTTEEEVDYVVELLKSKIGKLRDLSPLWEMYKDGVDLNSI QWAAH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAT96060.1 | cysteine desulfurase | Not tested | T-PAI | Protein | 4e-149 | 75 |
