Gene Information

Name : Desal_0469 (Desal_0469)
Accession : YP_002990075.1
Strain : Desulfovibrio salexigens DSM 2638
Genome accession: NC_012881
Putative virulence/resistance : Virulence
Product : glycyl-radical enzyme activating protein family
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG1180
EC number : 1.97.1.4
Position : 517316 - 518245 bp
Length : 930 bp
Strand : +
Note : KEGG: dde:Dde_3281 radical-activating enzyme; TIGRFAM: glycyl-radical enzyme activating protein family; PFAM: radical SAM domain protein; 4Fe-4S ferredoxin iron-sulfur binding domain protein

DNA sequence : 
GTGATTGAAAGAAAAGCACAGATATTCAACGTACAGAAATACAATATGCACGACGGTCCGGGAGTGAGAACTCTCGTATT
CTTCCAGGGTTGCCCCCTGCGCTGTGAATGGTGCTCGAATCCCGAGGGACAGTATAAAAAATTCCAGGTCCTTTTCAAAA
AGGATCAGTGTATAAATTGCGGAGCCTGTGTCTCCGTCTGTCCCGCAGGCGTGCACAAGATTGCCGCCGCAGGAAAACAT
TTCATCGACCGCGATGCTGAGTGTATCGGCTGCCGCAAATGTGAGCACGCCTGTCTGCAATCTGCACTGGCAATCGTTGG
CGAAACAAAGACCATTTCCGAACTGGTCGAGATCATCGAAGAAGACCGCCCGTTTTATGAAACTTCCGGCGGCGGCGTAA
CTCTCGGCGGCGGTGAAGTCCTGTCCCAGCCTGTAGCTGCGGCAAGCCTTCTCCAGACCTGTAAGCAGCGCGGTATCAAT
ACAGCCATTGAAACCTGTGGCTATGCCCGTCCTGAAGTAATTGAGAAGGTTGCACCTTTCGTGGATCTCTTTCTCTTTGA
CGTCAAACATATGAATTCCGAACGCCACCGTGAAATTACCGGTGTGCGTAATGAGATGATCCTCCAGAACCTGATCTGGC
TTCTTGATAACAGATACAACGTCAAGATCAGGATGCCCATGCTCAAGGGTGTTAACGACGGCGAAGAAGAAATCCTTCAG
CTGGTTGAGCTGCTTAAGCCTTATAAGGATCTCAAAAATTTCAAAGGGGTGGACCTGCTTCCCTACCACAAGATGGGTGT
GAACAAATACACTCAGCTCGGCTGGGAATACCCGGTGGAAGGTGACCCCAAACTGAGCAATGCCGATCTTGAACGCATTG
AGCAGGCTATCACCAAATACAATTTTCCGGTCTCAGTGGTCAGACACTAG

Protein sequence : 
MIERKAQIFNVQKYNMHDGPGVRTLVFFQGCPLRCEWCSNPEGQYKKFQVLFKKDQCINCGACVSVCPAGVHKIAAAGKH
FIDRDAECIGCRKCEHACLQSALAIVGETKTISELVEIIEEDRPFYETSGGGVTLGGGEVLSQPVAAASLLQTCKQRGIN
TAIETCGYARPEVIEKVAPFVDLFLFDVKHMNSERHREITGVRNEMILQNLIWLLDNRYNVKIRMPMLKGVNDGEEEILQ
LVELLKPYKDLKNFKGVDLLPYHKMGVNKYTQLGWEYPVEGDPKLSNADLERIEQAITKYNFPVSVVRH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42072.1 hypothetical protein Not tested PAI II 536 Protein 9e-66 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Desal_0469 YP_002990075.1 glycyl-radical enzyme activating protein family VFG1591 Protein 5e-66 47