Gene Information

Name : Desal_0574 (Desal_0574)
Accession : YP_002990179.1
Strain : Desulfovibrio salexigens DSM 2638
Genome accession: NC_012881
Putative virulence/resistance : Unknown
Product : transketolase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG3958
EC number : -
Position : 627041 - 627970 bp
Length : 930 bp
Strand : -
Note : PFAM: transketolase; transketolase; KEGG: gsu:GSU2918 transketolase, C-terminal subunit

DNA sequence :
ATGCAGAATATGCGAGACGAATTCGGCAAGGCCCTTGTGGAACTTGCCGCCACCCGTGACGATTTCGTGGTCCTTGATGC
CGACGTTGCCGGGGGAACCGGAACCTACCACTTCCGCAAAGCCTACCCGGACCGCTTCATTCAATGCGGTATTGCGGAGC
AGAACATGTTTTCCATGGCTGCTGGTCTGGCTGAATCCGGCATCATTCCTATTGTGACCTGTTATGCGGTCTTCGCTTCC
ATGCGCGCGCTGGAGCAGGCACGTAACTCAATCGCCTACCCTGATTTCAACGTTAAAATCGCCGCCAGTCATCTCGGCCT
TGATGTAGGGCCGGACGGAGCGACCCATCAGGCACTTGAAGATATTTCCATCTACCGCGCCATTCCCAATATGACCGTGG
TATCCCCTGCCGATCCTGTGGAAATGCGCGCAATACTGCCTTATCTGCTGGACAGCCACGGACCGCTGTACCTGCGCACC
GGACGCAGCCCGCTGCCAGAGGTATTTGATGCGAACACAAAATTTGAACCGGGCAAAGCACAAGTGCTGGTAGAAGGCGA
AGACTGCACCATCATGGCTGTAGGCGTTATGGTCCATCGGGCAGTACAGGCAGCACAAAAACTGTCCGAAGAAGGTATCT
TCTGCCGCGTATTAAACATGAGCTGGCTCAAACCGATGGATGAAGAAGCAGTCATTAAGGCTGCACAGGAAACCGGAGCC
ATTGTGACCTGCGAAGACCACAACAAGTACGGCGGCCTTGGCGGTGCTGTTATGGAGATAGTCTGCGAAAACCATCCGGT
TCCGGTGGAACGAGTAGCAATTGATGATATTTTCGGCAGCTCCGGAGAGCCGGAAGACCTTGCCCGTGAATACGGCCTCA
TGCCCGAGGATATTGCGAATGCTGTACGCCGGGTCCTGAAACGGAAATAG

Protein sequence :
MQNMRDEFGKALVELAATRDDFVVLDADVAGGTGTYHFRKAYPDRFIQCGIAEQNMFSMAAGLAESGIIPIVTCYAVFAS
MRALEQARNSIAYPDFNVKIAASHLGLDVGPDGATHQALEDISIYRAIPNMTVVSPADPVEMRAILPYLLDSHGPLYLRT
GRSPLPEVFDANTKFEPGKAQVLVEGEDCTIMAVGVMVHRAVQAAQKLSEEGIFCRVLNMSWLKPMDEEAVIKAAQETGA
IVTCEDHNKYGGLGGAVMEIVCENHPVPVERVAIDDIFGSSGEPEDLAREYGLMPEDIANAVRRVLKRK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAT96230.1 transketolase Not tested T-PAI Protein 2e-29 43
unnamed AAT96118.1 transketolase Not tested T-PAI Protein 5e-35 42