Gene Information

Name : Dd1591_1502 (Dd1591_1502)
Accession : YP_003003839.1
Strain : Dickeya zeae Ech1591
Genome accession: NC_012912
Putative virulence/resistance : Unknown
Product : type VI secretion system Vgr family protein
Function : -
COG functional category : S : Function unknown
COG ID : COG3501
EC number : -
Position : 1718568 - 1720421 bp
Length : 1854 bp
Strand : +
Note : TIGRFAM: type VI secretion system Vgr family protein; Rhs element Vgr protein; PFAM: Rhs element Vgr protein; KEGG: eca:ECA2867 putative rhs accessory genetic element

DNA sequence :
GTGGCCAACAGTACCGGATTGCAGTTTACCGTGAAGGTCGGCGCGTTGCCGGACACCACCTTCGCGGTGGTGGATTTTGA
ACTCAGCGAGGCGCTGAACCAGCCGTTTGCGCTGTCGCTCAATCTGGCCAGCAGCCAGCCCGGCATCGATTTCGGCGCGG
TGCTGGACCAGCCGTGCGAGCTGCTGGTGTGGTACGAAGGCGAACTGCAGCGCCGGGTTAGCGGTATCGTCAGCCGCTTT
GCCCAGGGCGACACCGGTTTTCGCCGCACCCGCTATCAGGCCGAGGTACGCCCGGCGCTGTGGCGGCTTGGTCTGCGTAC
CAACGCCCGCATCTTCCAGACCCAGAAGCCGGACACCATTATCAGTACCCTGCTGGAAGAAGCCGGGATCACCGATTACG
CCTTCGCCCTGCGCCACGAGCACGCGGTGCGCGAGTACTGCGTGCAGTACCGCGAAAGCGACCTGGCGTTCATCCACCGG
CTGGCGGCGGAAGAAGGGCTGTTCTACTTCCACGAATTTGAGGCCGGTAAGCACCGGGTGGTGTTCGCCGATGACGCCGG
TGCGCTGACCAAAGGCCCGGAGCTGTTCTTCAATCTCGCCACGCAGGGGCTGAGCGAAGGGGCGTATGTGCGGCGTTTCC
GCTACGCCGAAGCGGTCAGTACCGCCGAAGTGGCGCTGAAGGACTACAGCTTCAAAACGCCAGCCTACGGGTTGCTGCAT
AACAAGATGAGCAGCGAGCTGGACCATCAGCGCGAATCCTACCAGCACTTTGATTACCCCGGCCGTTTCAAGCAGGACCC
GAGCGGCAAGGCGTTTACCGGCTACCGGCTGGACGCGCTGCGCGCCGGCGCGATGACCGGCAGTGGCGAGTCCAACGCCG
CCGAACTGAGGCCGGGCAGCAGCTTTACCCTGACTGAGCACCCTAACCCGGCGTTTAATCTGGCCTGGCAGGTGGTGGCG
GTGACCCACAGCGGCCAGCAGCCGCAGGCGCTGGAGGAAGAGAGCGGCGGCGAGCCGACCACCCTCAGCAACAGTTTCGA
GGTGGTGAAAGCCACCACCACCTGGCGGGCGGCCATGCCGTACAAGCCGATGGTGGACGGCCCGCAGATTGCCACCGTGG
TCGGCCCGGCGGGCGAAGAGATTTACTGCGACGAGTTTGGCCGGGTGAAGCTGCAGTTCCCGTGGGACCGCTACGGTGCC
AGCGACGACCAGAGCTCCTGCTGGGTGCGGGTCAGTCAGGGCTGGGCCGGTGGCCAGTACGGCCTGATTGCCATTCCGCG
TATCGGTCATGAGGTGGTGGTGAGCTTTCTGGAAGGCGACCCGGACCAGCCCATCGTCACCGGGCGCACCTTTCACGCCA
CCAACCCCTCGCCGTATCCGTTGCCGGCCAACAAAACCCGCACCTCGCTGCGCACCCGTACCCATAAAGGGGCCGGGTTC
AACGAACTGCGCTTTGAAGACCAGGCCGGGCAGGAAGAGGTGTTTATCCACGCCCAGAAGGACATGAACACCGTGGTACT
GAATAACCGCAGCACGGCGGTGAATGCCAGTCATACCGAGAATGTCGGCGGCGACCAGACCGTGGTGGTGCAGCACAATC
AGACGGTGTCGGTGAAGGAAAATCAGGTCACCGAAATTCAGGGCGAGCAGACCGTCGCCGTCACCAAAAACCGTAACACC
ACCGTTGACGACAACGAGTCGCTGCAGGTGAAAAACAATATCGCCATCCAGTCCCAGAGCGGCGACATCCTGATTGCCAC
CGCGGGCGGCTTCATCGCCATTGACAGCGAAGGCAACATTTCCATTACCGGCAAAGGACTGGTGCTGAACGGCACCCGTA
TCGATTTGAACTGA

Protein sequence :
MANSTGLQFTVKVGALPDTTFAVVDFELSEALNQPFALSLNLASSQPGIDFGAVLDQPCELLVWYEGELQRRVSGIVSRF
AQGDTGFRRTRYQAEVRPALWRLGLRTNARIFQTQKPDTIISTLLEEAGITDYAFALRHEHAVREYCVQYRESDLAFIHR
LAAEEGLFYFHEFEAGKHRVVFADDAGALTKGPELFFNLATQGLSEGAYVRRFRYAEAVSTAEVALKDYSFKTPAYGLLH
NKMSSELDHQRESYQHFDYPGRFKQDPSGKAFTGYRLDALRAGAMTGSGESNAAELRPGSSFTLTEHPNPAFNLAWQVVA
VTHSGQQPQALEEESGGEPTTLSNSFEVVKATTTWRAAMPYKPMVDGPQIATVVGPAGEEIYCDEFGRVKLQFPWDRYGA
SDDQSSCWVRVSQGWAGGQYGLIAIPRIGHEVVVSFLEGDPDQPIVTGRTFHATNPSPYPLPANKTRTSLRTRTHKGAGF
NELRFEDQAGQEEVFIHAQKDMNTVVLNNRSTAVNASHTENVGGDQTVVVQHNQTVSVKENQVTEIQGEQTVAVTKNRNT
TVDDNESLQVKNNIAIQSQSGDILIATAGGFIAIDSEGNISITGKGLVLNGTRIDLN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
vgrG AAN64196.1 VgrG Not tested macrophage toxin pathogenicity island Protein 9e-166 54
aec15 YP_851429.1 hypothetical protein Not tested PAI II APEC-O1 Protein 1e-130 46
aec15 AAQ96709.1 Aec15 Not tested AGI-1 Protein 9e-131 46