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Name : Dd1591_1907 (Dd1591_1907) Accession : YP_003004236.1 Strain : Dickeya zeae Ech1591 Genome accession: NC_012912 Putative virulence/resistance : Virulence Product : type III secretion outer membrane pore, YscC/HrcC family Function : - COG functional category : N : Cell motility COG ID : COG1450 EC number : - Position : 2174610 - 2176685 bp Length : 2076 bp Strand : + Note : TIGRFAM: type III secretion outer membrane pore, YscC/HrcC family; PFAM: type II and III secretion system protein; NolW domain protein; KEGG: eca:ECA2100 type III secretion protein DNA sequence : ATGTGTAACGCGCTGTATGCACTATTGTTTAACCTTTACCGCCTGTTTTGCTGGTCGCTGGTGCTGATGGGGATGTTGCC TATCGCCCATGCGGCGACGCCGGCTGATTGGAGCAAAGGCGCTTATGCCTATTCCGCCGAACAGACGCCGCTATCGGCGG TGCTGCAGGATTTTGCCAATGGTCATGGTGTCGATCTGGTGTTGGGCAACATTGAAGACGTCAATATCGAGACAAAAATC CGCGCCGACAACGCCGTTGCGTTTCTCGACCGGTTAGCGTTGGAGCACCGTTTTCAGTGGTTCGTCTACAACAACGTGTT ATACGTCAGTCCGCAGGATGAACAGACCTCGGTACGTATCGAGGTATCGCAAGACGCCGCGCCGGACATGAAACAGGCAT TGACCGGCATCGGTTTGCTGGATTCCCGCTTCGGCTGGGGGGAATTGCCGGAAGAAGGCGTGGTGCTGGTCACCGGCCCG ACCGAATACATCAATTTGATCCGTAATTTCAGTCAGCAGCGTGAAACCAAAGAAGATCGTCGCAAGGTGATGATCTTTCC ATTGCGTTACGCCTCGGTATCGGACCGCACTATCCAGTATCGCGATCAGCGCCTGGTGATCCCCGGCGTGGCGACCATTC TGAATGAATTAATGGATGGCAACCGCAACACGCCCGCTGGTGCCGCGGCCGCGGGCAGCGGTATCGGCAGCGACGGCGGA ATGACGACGGCCGACGGCGCGGGCGGTGGGCAGGATGCCAGTAAGGCGATTGAAATGAACGCCCGCTCGATGCTGGCCAA GTTGGCGAGCCGTAACAGCGGCGGCGCCTCTTCGGCGTCCCGTAAAAAAGATCAGCTCAACGGCAAGGTATCGGCGGATG TGCGCAACAACGCACTGTTGGTGCGCGACGATGAAAAACGTCGGGATGAATACCAGCAACTGATCGACAAGATCGACGTG CCGCAAAATCTGGTCAACATCGATGCGATCATTCTGGATGTGGACCGCACAGCGCTTTCCAGGCTGGAAGCCAACTGGCA AGGGAAACTGGGTGCCGTTACCGGCGGTGCCAACATGATGTCAGGTTCCAGCACGCTGTTTGTCAGCGATTTCAAACGTT TTTCCGCTGATATTCAGGCGCTGGAAGGCGAGGGCACCGCATCTATCGTCGCCAATCCATCGGTACTGACGTTGGAAAAC CAGCCCGCGGTGATCGATTTCAGCCGTACCGCCTTTATTACCGCCACCGGCGAGCGTGTGGCGAATGTGCAGCCGGTGAC CGCCGGCACCAGCCTGCAGGTGACGCCGCGGGTCGTCGGCCACGGCGGCTCGAGCAGTATCCAACTGGTTATCGACATTG AAGACGGTCAGGTGGAAACCAATACCGAAGGCACCGCTTCCGGTGTGAAACGCGGTACGGTCAGTACGCAGGCGCTGATT GGCGAAAACCGGGCGTTGGTGTTGGGGGGATTTCACGTCGAAGAGAGCGGTGATCGCGATAAGCGTGTGCCGTTGCTCGG CGACATCCCCTGGATCGGCAAACTGTTCACCTCACGCCAGCATGAAGTCTCCCGCCGCGAACGGTTGTTTATTCTCACGC CGCACTTAATTGGCGATCAGAACGATCCCACCCGGTTTGTCTCGGCGGATAACCGTCGTCAACTGAATGACGCTATGGGG CGAGTGGCCCAGCGCAACAGCAAAACCGATCTGTTCGGCACAGTAGAAAATGCCCTGCGCGATCTGGCCAGCGGCCAGAC GCCGGCCGGTTTCACCATTGACGGCAGCGGGCCGACATTGTCGGAGATTTGTCGCACATCGCCATCAATGAGTTATCAGA GTCATCGTCACCAGTGGTACAGCAATTTGTCTCTCAGCCTGACGGTCGGGGTGGTGAAAAACACCGGTACTCAGCCCCTG CGCTTTGACGAAGCCAGCTGTGCCAATAGCCGTACGCTGGCGGTCGCCGCCTGGCCGAAAACCACGCTGGCACCCGGTGA ATCCACCGAGGTGTATCTGGCGCTGTTGCCGGCCAAAAACGCGCAACCGTCTCGCGCATCCTTAATCAAACCCTGA Protein sequence : MCNALYALLFNLYRLFCWSLVLMGMLPIAHAATPADWSKGAYAYSAEQTPLSAVLQDFANGHGVDLVLGNIEDVNIETKI RADNAVAFLDRLALEHRFQWFVYNNVLYVSPQDEQTSVRIEVSQDAAPDMKQALTGIGLLDSRFGWGELPEEGVVLVTGP TEYINLIRNFSQQRETKEDRRKVMIFPLRYASVSDRTIQYRDQRLVIPGVATILNELMDGNRNTPAGAAAAGSGIGSDGG MTTADGAGGGQDASKAIEMNARSMLAKLASRNSGGASSASRKKDQLNGKVSADVRNNALLVRDDEKRRDEYQQLIDKIDV PQNLVNIDAIILDVDRTALSRLEANWQGKLGAVTGGANMMSGSSTLFVSDFKRFSADIQALEGEGTASIVANPSVLTLEN QPAVIDFSRTAFITATGERVANVQPVTAGTSLQVTPRVVGHGGSSSIQLVIDIEDGQVETNTEGTASGVKRGTVSTQALI GENRALVLGGFHVEESGDRDKRVPLLGDIPWIGKLFTSRQHEVSRRERLFILTPHLIGDQNDPTRFVSADNRRQLNDAMG RVAQRNSKTDLFGTVENALRDLASGQTPAGFTIDGSGPTLSEICRTSPSMSYQSHRHQWYSNLSLSLTVGVVKNTGTQPL RFDEASCANSRTLAVAAWPKTTLAPGESTEVYLALLPAKNAQPSRASLIKP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hrcC | AAB49179.1 | HrcC | Virulence | Hrp PAI | Protein | 0.0 | 68 |
| hrcC | AAT96354.1 | HrcC | Virulence | S-PAI | Protein | 4e-167 | 53 |
| hrcC | ABA47303.1 | HrcC | Virulence | S-PAI | Protein | 3e-167 | 52 |
| hrcC | AAT96274.1 | HrcC | Virulence | S-PAI | Protein | 1e-164 | 52 |
| hrcC | AAT96315.1 | HrcC | Virulence | S-PAI | Protein | 5e-165 | 52 |
| hrcC | NP_791216.2 | outer-membrane type III secretion protein HrcC | Virulence | Hrp PAI | Protein | 8e-144 | 44 |
| hrcC | AAC34756.1 | HrcC | Virulence | Hrp PAI | Protein | 1e-136 | 43 |
