|
Name : Dd1591_1917 (Dd1591_1917) Accession : YP_003004246.1 Strain : Dickeya zeae Ech1591 Genome accession: NC_012912 Putative virulence/resistance : Unknown Product : zinc finger CHC2-family protein Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0358 EC number : - Position : 2194248 - 2197502 bp Length : 3255 bp Strand : + Note : PFAM: zinc finger CHC2-family protein; DNA primase catalytic core domain; TOPRIM domain protein; SMART: zinc finger CHC2-family protein; KEGG: plu:plu3714 hypothetical protein DNA sequence : ATGGGACGACTGACACCGGCAGAGCTGGAGCAACTGAAACGCGGGGTGTCGCTGCGGGCCGTGGCGCAGAGTCAGGGTCA TACACTGAAAAAGCAGGGGGCGGACAGTTATGTGTGCCGGTGTCCGTTCCATCAGGAGAATACGCCGTCCTGTGTCATCA CGCCGTCGAAGAACCTGTACCACTGCTTCGGCTGCGGGGCGTCGGGGTCGGTGCTGGACTGGCTGCAACACACCGAGCGG CTGACGTATCCGCAAACCCTGCTGCGGCTGCGGGAGCTGGCCGGGACAGCCTCTTCTTTAGCCGCCGCCCCGGCGTTGTC TTCCCCGCCGGTTCCGCCCCGCCAGAAACTCGCCGACCTGGATGACGACGGTCAGGCGCTGCTGAATCAGGTTATCCACT TCTACCACCAGAGCCTGCTCGACAGCCCGGAGGCGCAGCAGTGGCTGGCCGGTCGCGGGCTGAGTCATCCTGAACTGGTG AGTCACTTCCGGCTGGGGTTCGCCGGTCATCACGGCATCGGCGGCAGCGCGGGCGTGTTGCCGTCCTCGTCGAGTCAGGA GGGAAAGCGGCTGCGCGAGAAACTGGCCGGGCTGGGGGTGCTGCGCGCCGCCACCAGACAGGACCACTTCCGGGGCTGCG TGGTGATGCCGGTTATCGGCTGGTCGGAGTCGGCGAGCGTGGCGCAGCGGGGACGGGTGATGCAGTTGTACGGGCGTCGG GTGCAGCCGGACCACAAAATCCTCAAAGGCTCGCCGAAGCACCTGTATCTGCCGTCACCGCTGGCCGGGGTGTGGAACGA GGAAGCACTGAAGGCGTCGTCCGACCTTATCCTGTGCGAGTCGCTGATCGACGCGATGACGTTCTGGTGTGCCGGGTTCC GCAACGTGACCACGGCGTACGGGGCCAACGGCTTTACCGCTGACCATCTGGCGGCGTTGCAGTATCACGGCGTGAAGCGG GTGCAGATAGCCTATGACCGGGACGAAGCGGGCGACCGGGGCGCGGAGAGCGTGGCGGCGGAGCTGCTGGAAGCGGGTAT CGAGGCATGGCGGGTGCGGTTCCCGCCGGGGCTGGATGCGAATGCCTATGCACTGAAGAGTGGCCACCCGGAATCGGCGT TAGGGCTGGCACTGGAGCAGGCGGCGTGGATGGGTCAGGGCAGCGGGCCGGGGGTGGTGTTCTCCCGTGACATGCCATCC GGCGGGGATGATACCGCTTCTTCCTTAGCCGCCCCGGCGGGCGTACCGGCACCGACGGTGGCGGGGGAGTTAACCGCGTC CGGCGACCTGCTGCTGACCCACGGCCCGCGCGTGTGGCGGGTGCGCGGCTGGCAGAAAAACACCGTCGCCGAGGTGATGA AGGTCAACGTGCAGGTGCGGGACGAGTCAACCGGCGCGCTGCATGTGGACAGCCTGGACCTGTACAGTTCGCGGCAGCGT CAGGGTTATATCAGCGCGGCGGCGGCAGAGCTGGGTTGTGACGCGTCGGTTATCAAGCGCGAATGCGGGCGGGTGCTGCT GATGCTGGAGCAGCAACAGGCGCATCAGCGGCAGGCGGCAGAGCAGGCCGAACGCGCTCCGGCGGTCACGGTCAGCGCGG AAGACGAGGCGGCGGCGCTGGAGCTGCTGACATCCCCCGACCTTGCCGCACGTATCGTGGACGACCTCGCGGCCTGCGGG GTGGTGGGGGAAAGTACCAATCTGCTGACCGGGTATCTGGCGGCGACGTCGCGCAAGCTGGATAAACCGCTGGCCGTCCT GATACAGAGCAGTTCGGCGGCGGGAAAATCCTCGCTGATGGACGCGGTGCTGGGGATGATGCCGGAGGAAGAGCGTATCC AGTACAGCGCGATGACCGGGCAGAGCCTGTATTACCTCGGTGAAACCTCGTTACAGCACAAGATACTGGCGATAGCCGAG GAAGAGGGGGTGCGGCAGGCGGCGTATGCGCTCAAGCTGTTGCAGTCGGACGGGGAACTGAAAATCGCGTCAACCGGCAA GAACGAGCAGAGCGGCGAACTGGTGACGCGGGAATACAAGGTGCAGGGGCCGGTGATGCTGATGCTGACCACCACGGCCA GCGACGTGGACGAAGAGCTGCTGAACCGCTGTCTGGTGTTGACGGTGAACGAATCGCGGGAGCAGACGCAGGCCATCCAT GCGATGCAGCGCCACGGGCAGACGCTGGCCGGACTGCTCCAGTCTTCAGAAAAGCAGTACCTGACGACGTTGCATCAGAA CGTACAGCGGCTGCTGCGGCCGCTGAAGGTGGTGAATCCGTATGCCGACCGGCTGACGTTCCTGTCGGACAAGACCCGCA CCCGGCGCGACCATATGAAGTACCTGACGTTAATCCAGGCCATCGCGCTGTTGCATCAGTACCAGCGTGAGGTGAAACGG GTGACGCACCGGGGGCAGGTCATCGAGTATATCGAGGTGGAGAAAAGCGATATCGCGCTGGCCAATCAACTGGCCCACGA GGTGCTGGGCCGGACGCTGGATGAAATGCCGCCGCAGACGCGCAAGCTGCTGGTATGGCTGAAGGGCTGGGTGCAGGAAA CGGCGCAGGGTCAGGCGGTGAAGGCGGACGAGATACGGTTCACACGACGGGACGTGCGCTCCTCGCTGGGCTGGGGTGAC ACGCAACTGAAAATCCACCTTGGCAGGCTGCTGGAAATGGAATACCTGCTGCTGTTCCGGCGCGGTCTGACGTATGAATA CGGGCTGCTGTGGGACGGTGACGACAACGGCGGGGCGCACCTGTGCGGGCTGCTGGAGGTGGACGATACCGGGCCGGAGA CAGAGGGCAAAGCGTACCGGTCGGGGCTGGATACCGTTCAGTCGGCCCCCGGTCGGGGTGTGGTCGGCAGCCGGTCGGGG CATGAAAAACCGGCGTCAGGCCAGATGGCACAAGGCTCGGATACCGAACCGGTCGGGGTGACGCCGGATGTGGTAATCAG GGGAAAAGAAAAATCGCCAGCCGTGCCGCTGCCTGCGAGTAAAAACGGCGTGGCTGGGGGCAATGCCGACCGGTCGGGGC TGGAGGTCACTCAGTCGGCCCCCGGTCGGGGTATGGTCGGCAGCCGGTCGGTGGGTGAAAAACCGGCGTCAGGCCAGACA GGACAAGGCTCGGATACCGAACCGGTCGGGGTGAAGCCGGATACGGTAAACAGGCGGAAACAACAATCGCCATCCGCGCC GCTGCCTGCGGTCGGCGATACGCCGGTTGAGAGCGCGGGGGTGACACATGGCTAA Protein sequence : MGRLTPAELEQLKRGVSLRAVAQSQGHTLKKQGADSYVCRCPFHQENTPSCVITPSKNLYHCFGCGASGSVLDWLQHTER LTYPQTLLRLRELAGTASSLAAAPALSSPPVPPRQKLADLDDDGQALLNQVIHFYHQSLLDSPEAQQWLAGRGLSHPELV SHFRLGFAGHHGIGGSAGVLPSSSSQEGKRLREKLAGLGVLRAATRQDHFRGCVVMPVIGWSESASVAQRGRVMQLYGRR VQPDHKILKGSPKHLYLPSPLAGVWNEEALKASSDLILCESLIDAMTFWCAGFRNVTTAYGANGFTADHLAALQYHGVKR VQIAYDRDEAGDRGAESVAAELLEAGIEAWRVRFPPGLDANAYALKSGHPESALGLALEQAAWMGQGSGPGVVFSRDMPS GGDDTASSLAAPAGVPAPTVAGELTASGDLLLTHGPRVWRVRGWQKNTVAEVMKVNVQVRDESTGALHVDSLDLYSSRQR QGYISAAAAELGCDASVIKRECGRVLLMLEQQQAHQRQAAEQAERAPAVTVSAEDEAAALELLTSPDLAARIVDDLAACG VVGESTNLLTGYLAATSRKLDKPLAVLIQSSSAAGKSSLMDAVLGMMPEEERIQYSAMTGQSLYYLGETSLQHKILAIAE EEGVRQAAYALKLLQSDGELKIASTGKNEQSGELVTREYKVQGPVMLMLTTTASDVDEELLNRCLVLTVNESREQTQAIH AMQRHGQTLAGLLQSSEKQYLTTLHQNVQRLLRPLKVVNPYADRLTFLSDKTRTRRDHMKYLTLIQAIALLHQYQREVKR VTHRGQVIEYIEVEKSDIALANQLAHEVLGRTLDEMPPQTRKLLVWLKGWVQETAQGQAVKADEIRFTRRDVRSSLGWGD TQLKIHLGRLLEMEYLLLFRRGLTYEYGLLWDGDDNGGAHLCGLLEVDDTGPETEGKAYRSGLDTVQSAPGRGVVGSRSG HEKPASGQMAQGSDTEPVGVTPDVVIRGKEKSPAVPLPASKNGVAGGNADRSGLEVTQSAPGRGMVGSRSVGEKPASGQT GQGSDTEPVGVKPDTVNRRKQQSPSAPLPAVGDTPVESAGVTHG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| dnaG | AAN64202.1 | DnaG primase-like | Not tested | macrophage toxin pathogenicity island | Protein | 0.0 | 56 |
