Gene Information

Name : Dd1591_1977 (Dd1591_1977)
Accession : YP_003004305.1
Strain : Dickeya zeae Ech1591
Genome accession: NC_012912
Putative virulence/resistance : Unknown
Product : cold shock-like protein CspC
Function : -
COG functional category : K : Transcription
COG ID : COG1278
EC number : -
Position : 2260879 - 2261088 bp
Length : 210 bp
Strand : +
Note : PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: eca:ECA2391 cold shock-like protein CspC

DNA sequence :
ATGGCAAAGATTAAAGGTCAGGTTAAGTGGTTCAACGAGTCTAAAGGCTTCGGTTTCATTACTCCGGCTGATGGCAGCAA
AGATGTGTTCGTACACTTCTCTGCAATTCAGGGCAACGGCTTTAAAACATTGGCCGAAGGCCAGAATGTTGAGTTTGAAA
TTCAGGATGGCCAGAAAGGCCCTTCAGCAGTGAATGTTGTTGCGCTGTAA

Protein sequence :
MAKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPSAVNVVAL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAO18076.1 unknown Not tested TTSS locus Protein 2e-19 72
cspH YP_216241.1 cold shock protein-like protein Not tested SPI-11 Protein 5e-06 44